Evidence map›Paper›PMID 34310974›Full record

ArticleJournal of virological methods2021

Performance evaluation of a dead-end hollowfiber ultrafiltration method for enumeration of somatic and F+ coliphage from recreational waters.

Asja Korajkic, Brian R McMinn, Michael P Herrmann, Adin C Pemberton, Julie Kelleher, Kevin Oshima, Eric N Villegas

Abstract read
In one paragraph

Article in Journal of virological methods, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Asja KorajkicUnited States Environmental Protection Agency, Office of Research and Development, USA. Electronic address: korajkic.asja@epa.gov.
Brian R McMinnUnited States Environmental Protection Agency, Office of Research and Development, USA.
Michael P HerrmannUnited States Environmental Protection Agency, Office of Research and Development, USA.
Adin C PembertonUnited States Environmental Protection Agency, Office of Research and Development, USA.
Julie KelleherUnited States Environmental Protection Agency, Office of Research and Development, USA.
Kevin OshimaUnited States Environmental Protection Agency, Office of Research and Development, USA.
Eric N VillegasUnited States Environmental Protection Agency, Office of Research and Development, USA.

Funding

Intramural EPA EPA999999
6 · The paper itself

Abstract

Dead-end hollow fiber ultrafiltration combined with a single agar layer assay (D-HFUF-SAL) has potential use in the assessment of sanitary quality of recreational waters through enumeration of coliphage counts as measures of fecal contamination. However, information on applicability across a broad range of sites and water types is limited. Here, we tested the performance of D-HFUF-SAL on 49 marine and freshwater samples. Effect of method used to titer the spiking suspension (SAL versus double agar layer [DAL]) on percent recovery was also evaluated. Average somatic coliphage recovery (72 % ± 27) was significantly higher (p < 0.0001) compared to F+ (53 % ± 19). This was more pronounced for marine (p ≤ 0.0001) compared to freshwaters (p = 0.0134). Neither method affected somatic coliphage, but DAL (28 % ± 12) significantly (p < 0.0001) underestimated F + coliphage recoveries compared to SAL (53 % ± 19). Overall, results indicate that, while D-HFUF-SAL performed well over a wide variety of water types, F + coliphage recoveries were significantly reduced for marine waters suggesting that some components unique to this habitat may interfere with the assay performance. More importantly, our findings indicate that choice of spike titer method merits careful consideration since it may under-estimate method percent recovery.

Indexed as

UltrafiltrationWater MicrobiologyColiphagesFecesFresh WaterDead-end hollowfiber ultrafiltrationDouble agar layerMethod performanceSingle agar layerSomatic and F+ coliphage

Identifiers

PMID34310974
PMCPMC8982549

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.