Evidence map›Paper›PMID 34310207›Full record

ArticleAntimicrobial agents and chemotherapy2021

Kinetic and Structural Characterization of the First B3 Metallo-β-Lactamase with an Active-Site Glutamic Acid.

Liam A Wilson, Esmée G Knaven, Marc T Morris, Marcelo Monteiro Pedroso, Christopher J Schofield, Thomas B Brück, Mikael Boden, David W Waite, Philip Hugenholtz, Luke Guddat and 1 more

Open access · greenAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
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  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Liam A Wilson *School of Chemistry and Molecular Biosciences, The University of Queenslandgrid.1003.2, St. Lucia, QLD, Brisbane, Australia.ORCID 0000-0002-4439-7738
Esmée G Knaven *School of Chemistry and Molecular Biosciences, The University of Queenslandgrid.1003.2, St. Lucia, QLD, Brisbane, Australia.
Marc T MorrisSchool of Chemistry and Molecular Biosciences, The University of Queenslandgrid.1003.2, St. Lucia, QLD, Brisbane, Australia.
Marcelo Monteiro PedrosoSchool of Chemistry and Molecular Biosciences, The University of Queenslandgrid.1003.2, St. Lucia, QLD, Brisbane, Australia.
Christopher J SchofieldDepartment of Chemistry and Ineos Oxford Institute for Antimicrobial Research, Chemistry Research Laboratory, University of Oxfordgrid.4991.5, Oxford, United Kingdom.ORCID 0000-0002-0290-6565
Thomas B BrückDepartment of Chemistry, Technical University of Munichgrid.6936.a, Garching, Germany.ORCID 0000-0002-2113-6957
Mikael BodenSchool of Chemistry and Molecular Biosciences, The University of Queenslandgrid.1003.2, St. Lucia, QLD, Brisbane, Australia.
David W WaiteSchool of Chemistry and Molecular Biosciences, The University of Queenslandgrid.1003.2, St. Lucia, QLD, Brisbane, Australia.
Philip HugenholtzSchool of Chemistry and Molecular Biosciences, The University of Queenslandgrid.1003.2, St. Lucia, QLD, Brisbane, Australia.
Luke GuddatSchool of Chemistry and Molecular Biosciences, The University of Queenslandgrid.1003.2, St. Lucia, QLD, Brisbane, Australia.
Gerhard SchenkSchool of Chemistry and Molecular Biosciences, The University of Queenslandgrid.1003.2, St. Lucia, QLD, Brisbane, Australia.ORCID 0000-0001-8619-0631
The University of Queensland · AUTechnical University of Munich · DEUniversity of Oxford · GB

Funding

Medical Research Council MR/P007503/1
6 · The paper itself

Abstract

The structural diversity in metallo-β-lactamases (MBLs), especially in the vicinity of the active site, has been a major hurdle in the development of clinically effective inhibitors. Representatives from three variants of the B3 MBL subclass, containing either the canonical HHH/DHH active-site motif (present in the majority of MBLs in this subclass) or the QHH/DHH (B3-Q) or HRH/DQK (B3-RQK) variations, were reported previously. Here, we describe the structure and kinetic properties of the first example (SIE-1) of a fourth variant containing the EHH/DHH active-site motif (B3-E). SIE-1 was identified in the hexachlorocyclohexane-degrading bacterium Sphingobium indicum, and kinetic analyses demonstrate that although it is active against a wide range of antibiotics, its efficiency is lower than that of other B3 MBLs but has increased efficiency toward cephalosporins relative to other β-lactam substrates. The overall fold of SIE-1 is characteristic of the MBLs; the notable variation is observed in the Zn1 site due to the replacement of the canonical His116 by a glutamate. The unusual preference of SIE-1 for cephalosporins and its occurrence in a widespread environmental organism suggest the scope for increased MBL-mediated β-lactam resistance. Thus, it is relevant to include SIE-1 in MBL inhibitor design studies to widen the therapeutic scope of much needed antiresistance drugs.

Indexed as

beta-LactamasesSphingomonadaceaeAnti-Bacterial Agentsbeta-Lactamase InhibitorsCatalytic DomainGlutamic AcidAnti-Bacterial Agentsbeta-Lactamase Inhibitorsbeta-LactamasesGlutamic Acidbeta-lactamasesenzyme kineticsmechanisms of resistancemetalloenzymes

Identifiers

PMID34310207
PMCPMC8448093
OpenAlexW3186201915

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.