Evidence map›Paper›PMID 34306174›Full record

ArticleComputational and mathematical methods in medicine2021

A Computationally Virtual Histological Staining Method to Ovarian Cancer Tissue by Deep Generative Adversarial Networks.

Xiangyu Meng, Xin Li, Xun Wang

Open access · hybridAbstract read
In one paragraph

Article in Computational and mathematical methods in medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 32 citations in OpenAlex.

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  12. Digital staining facilitates biomedical microscopy.Frontiers in bioinformatics · 2023
    Article
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  14. Deep Image Watermarking to JPEG Compression Based on Mixed-Frequency Channel Attention.Computational and mathematical methods in medicine · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 1 country.

Xiangyu MengCollege of Computer Science and Technology, China University of Petroleum, Qingdao, 266580 Shandong, China.ORCID https://orcid.org/0000-0001-5696-3090
Xin LiDepartment of Gynecology 2, Renmin Hospital of Wuhan University, Wuhan, 430060 Hubei, China.ORCID https://orcid.org/0000-0002-7643-4898
Xun WangCollege of Computer Science and Technology, China University of Petroleum, Qingdao, 266580 Shandong, China.ORCID https://orcid.org/0000-0002-2741-433X
Inner Mongolia Agricultural University · CNInstitute of Computing Technology · CNWuhan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Histological analysis to tissue samples is elemental for diagnosing the risk and severity of ovarian cancer. The commonly used Hematoxylin and Eosin (H&E) staining method involves complex steps and strict requirements, which would seriously impact the research of histological analysis of the ovarian cancer. Virtual histological staining by the Generative Adversarial Network (GAN) provides a feasible way for these problems, yet it is still a challenge of using deep learning technology since the amounts of data available are quite limited for training. Based on the idea of GAN, we propose a weakly supervised learning method to generate autofluorescence images of unstained ovarian tissue sections corresponding to H&E staining sections of ovarian tissue. Using the above method, we constructed the supervision conditions for the virtual staining process, which makes the image quality synthesized in the subsequent virtual staining stage more perfect. Through the doctors' evaluation of our results, the accuracy of ovarian cancer unstained fluorescence image generated by our method reached 93%. At the same time, we evaluated the image quality of the generated images, where the FID reached 175.969, the IS score reached 1.311, and the MS reached 0.717. Based on the image-to-image translation method, we use the data set constructed in the previous step to implement a virtual staining method that is accurate to tissue cells. The accuracy of staining through the doctor's assessment reached 97%. At the same time, the accuracy of visual evaluation based on deep learning reached 95%.

Indexed as

AlgorithmsComputational BiologyDeep LearningFemaleHumansImage Interpretation, Computer-AssistedNeural Networks, ComputerOptical ImagingOvarian NeoplasmsReproducibility of ResultsStaining and LabelingUser-Computer Interface

Identifiers

PMID34306174
PMCPMC8270697
OpenAlexW3174491737

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.