Evidence map›Paper›PMID 34305141›Full record

ArticleAIChE journal. American Institute of Chemical Engineers2020

Characterization of flavin binding in oxygen-independent fluorescent reporters.

Nolan T Anderson, Kevin B Weyant, Arnab Mukherjee

Open access · greenAbstract read
In one paragraph

Article in AIChE journal. American Institute of Chemical Engineers, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Rational Design of a Circularly Permuted Flavin-Based Fluorescent Protein.Chembiochem : a European journal of chemical biology · 2024
    Article
  2. Article
  3. Article
  4. Article
  5. Extreme dependence of Chloroflexus aggregans LOV domain thermo- and photostability on the bound flavin species.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2021
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Nolan T Anderson *Department of Chemical Engineering, University of California, Santa Barbara, California, 93106.
Kevin B Weyant *Smith School of Chemical & Biomolecular Engineering, Cornell University, Ithaca, New York, 14853.
Arnab MukherjeeDepartment of Chemical Engineering, University of California, Santa Barbara, California, 93106.ORCID 0000-0003-3571-8015
University of California, Santa Barbara · USCornell University · US

Funding

Engineering fluorescence and magnetic resonance reporter genes for imaging biological function in hypoxic cells and in vivoR35GM133530 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI MUKHERJEE, ARNAB · 2019 to 2023
$1.6M
NIGMS NIH HHS R35 GM133530
6 · The paper itself

Abstract

Fluorescent proteins based on light, oxygen, and voltage (LOV) sensing photoreceptors are among the few reporter gene technologies available for studying living systems in oxygen-free environments that render reporters based on the green fluorescent protein nonfluorescent. LOV reporters develop fluorescence by binding flavin mononucleotide (FMN), which they endogenously obtain from cells. As FMN is essential to cell physiology as well as for determining fluorescence in LOV proteins, it is important to be able to study and characterize flavin binding in LOV reporters. To this end, we report a method for reversibly separating FMN from two commonly used LOV reporters to prepare stable and soluble apoproteins. Using fluorescence titration, we measured the equilibrium dissociation constant for binding with all three cellular flavins: FMN, flavin adenine dinucleotide, and riboflavin. Finally, we exploit the riboflavin affinity of apo LOV reporters, identified in this work, to develop a fluorescence turn-on biosensor for vitamin B2.

Identifiers

PMID34305141
PMCPMC8301602
OpenAlexW3090064140

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.