Evidence map›Paper›PMID 34303700›Full record

ArticleDevelopmental biology2021

Temporal single-cell transcriptomes of zebrafish spinal cord pMN progenitors reveal distinct neuronal and glial progenitor populations.

Kayt Scott, Rebecca O'Rourke, Caitlin C Winkler, Christina A Kearns, Bruce Appel

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 33 citations in OpenAlex.

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  14. A molecular atlas of adultbioRxiv : the preprint server for biology · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Kayt ScottDepartment of Pediatrics, Section of Developmental Biology, Colorado, 80045, USA; Cell Biology, Stem Cells and Development Training Program, Colorado, 80045, USA.
Rebecca O'RourkeDepartment of Pediatrics, Section of Developmental Biology, Colorado, 80045, USA.
Caitlin C WinklerDepartment of Pediatrics, Section of Developmental Biology, Colorado, 80045, USA; RNA Bioscience Initiative and Department of Biochemistry and Molecular Genetics, Colorado, 80045, USA.
Christina A KearnsDepartment of Pediatrics, Section of Developmental Biology, Colorado, 80045, USA.
Bruce AppelDepartment of Pediatrics, Section of Developmental Biology, Colorado, 80045, USA; Children's Hospital Colorado, University of Colorado Anschutz Medical Campus, Aurora, CO, 80045, USA. Electronic address: bruce.appel@cuanschutz.edu.
Cell Technology (China) · CNChildren's Hospital Colorado · USUniversity of Colorado Anschutz Medical Campus · US

Funding

University of Colorado Cancer Center Support Grant - Lung Cancer Patient-Derived Xenografts with Autologous Human Immune SystemsP30CA046934 · NCI · UNIVERSITY OF COLORADO DENVER · PI James V Degregori · 1988 to 2026
$117.0M
ZEBRAFISH TRANSGENIC CORE - ROCKY MOUNTAIN NEUROLOGICAL DISORDERS CORE CENTERP30NS048154 · NINDS · UNIVERSITY OF COLORADO DENVER · PI RIBERA, ANGELES BADELL · 2004 to 2020
$10.1M
Mechanisms of Developmental MyelinationR35NS122191 · NINDS · UNIVERSITY OF COLORADO DENVER · PI Bruce H Appel · 2021 to 2026
$5.4M
Genetic Analysis of Oligodendrocyte SpecificationR01NS046668 · NINDS · VANDERBILT UNIVERSITY · PI APPEL, BRUCE H · 2004 to 2019
$4.8M
Prdm8 inhibits oligodendrocyte differentiation through gene repressionF31NS116922 · NINDS · UNIVERSITY OF COLORADO DENVER · PI SCOTT, KATHRYN F · 2020 to 2020
$27k
NCI NIH HHS P30 CA046934NINDS NIH HHS F31 NS116922NINDS NIH HHS P30 NS048154NINDS NIH HHS R01 NS046668NINDS NIH HHS R35 NS122191
6 · The paper itself

Abstract

Ventral spinal cord progenitor cells, which express the basic helix loop helix transcription factor Olig2, sequentially produce motor neurons and oligodendrocyte precursor cells (OPCs). Following specification some OPCs differentiate as myelinating oligodendrocytes while others persist as OPCs. Though a considerable amount of work has described the molecular profiles that define motor neurons, OPCs, and oligodendrocytes, less is known about the progenitors that produce them. To identify the developmental origins and transcriptional profiles of motor neurons and OPCs, we performed single-cell RNA sequencing on isolated pMN cells from embryonic zebrafish trunk tissue at stages that encompassed motor neurogenesis, OPC specification, and initiation of oligodendrocyte differentiation. Downstream analyses revealed two distinct pMN progenitor populations: one that appears to produce neurons and one that appears to produce OPCs. This latter population, called Pre-OPCs, is marked by expression of GS Homeobox 2 (gsx2), a gene that encodes a homeobox transcription factor. Using fluorescent in situ hybridizations, we identified gsx2-expressing Pre-OPCs in the spinal cord prior to expression of canonical OPC marker genes. Our data therefore reveal heterogeneous gene expression profiles among pMN progenitors, supporting prior fate mapping evidence.

Indexed as

AnimalsBasic Helix-Loop-Helix ProteinsCell DifferentiationCell LineageGene Expression ProfilingGene Expression Regulation, DevelopmentalHedgehog ProteinsMotor NeuronsNerve Tissue ProteinsNeural Stem CellsNeurogenesisOligodendrogliaSingle-Cell AnalysisSpatio-Temporal AnalysisSpinal CordTranscription FactorsBasic Helix-Loop-Helix ProteinsHedgehog ProteinsNerve Tissue ProteinsTranscription FactorsZebrafish ProteinsMotor neuronsNeural developmentNeural progenitorsOligodendrocyteZebrafish

Identifiers

PMID34303700
PMCPMC8410680
OpenAlexW3183875858

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.