Evidence map›Paper›PMID 34302356›Full record

ArticleClinical genetics2021

Clinical and genetic spectrum of 104 Indian families with central nervous system white matter abnormalities.

Parneet Kaur, Michelle C do Rosario, Malavika Hebbar, Suvasini Sharma, Neethukrishna Kausthubham, Karthik Nair, Shrikiran A, Ramesh Bhat Y, Leslie Edward S Lewis, Sheela Nampoothiri and 22 more

Open access · bronzeAbstract read
In one paragraph

Article in Clinical genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
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  5. Exome Sequencing in Monogenic Forms of Rickets.Indian journal of pediatrics · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

32 authors at 15 institutions in 3 countries.

Parneet KaurDepartment of Medical Genetics, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India.
Michelle C do RosarioDepartment of Medical Genetics, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India.
Malavika HebbarDepartment of Medical Genetics, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India.
Suvasini SharmaDepartment of Paediatrics, Lady Hardinge Medical College and Associated Kalawati Saran Children's Hospital, New Delhi, India.
Neethukrishna KausthubhamDepartment of Medical Genetics, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India.
Karthik NairDepartment of Medical Genetics, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India.
Shrikiran ADepartment of Paediatrics, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India.
Ramesh Bhat YDepartment of Paediatrics, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India.
Leslie Edward S LewisDepartment of Paediatrics, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India.
Sheela NampoothiriDepartment of Paediatric Genetics, Amrita Institute of Medical Sciences and Research Centre, Kochi, India.
Siddaramappa J PatilDivision of Genetics, Mazumdar Shaw Medical Centre, Bangalore, India.ORCID 0000-0001-7154-3449
Narayanaswami SureshDepartment of Paediatrics, Lady Hardinge Medical College and Associated Kalawati Saran Children's Hospital, New Delhi, India.
Sunita Bijarnia MahayInstitute of Medical Genetics and Genomics, Sir Ganga Ram Hospital, New Delhi, India.ORCID 0000-0002-5255-8212
Ratna Dua PuriInstitute of Medical Genetics and Genomics, Sir Ganga Ram Hospital, New Delhi, India.ORCID 0000-0003-2694-6147
Shivanand PaiDepartment of Neurology, Kasturba Medical College, Mangalore, Manipal Academy of Higher Education, Manipal, India.
Anupriya KaurDepartment of Paediatrics, Postgraduate Institute of Medical Education and Research, Chandigarh, India.
Rakshith KcDepartment of Neurology, Kasturba Medical College, Mangalore, Manipal Academy of Higher Education, Manipal, India.
Nutan KamathDepartment of Paediatrics, Kasturba Medical College, Mangalore, Manipal Academy of Higher Education, Manipal, India.
Shruti BajajJaslok Hospital and Research Centre, Mumbai, India.
Ali KumbleDepartment of Paediatrics, Indiana Hospital and Heart Institute, Mangalore, India.
Rajesh ShettyFirst Neuro Hospital, Mangalore, India.
Rathika ShenoyDepartment of Paediatrics, K.S. Hegde Medical Academy, NITTE University, Mangalore, India.
Mahesh KamateDepartment of Paediatrics, Jawaharlal Nehru Medical College, Belgaum, India.
Hitesh ShahDepartment of Orthopaedics, Kasturba Medical College, Manipal Academy of Higher Education, Manipal, India.
Mamta N MuranjanDepartment of Pediatrics, Genetics Division, Seth Gordhandas Sunderdas Medical College and King Edward VII Memorial Hospital, Mumbai, Maharashtra, India.
Yatheesha BlDheemahi Child Neurology and Development Center, Shimoga, India.
K Shreedhara AvabrathaDepartment of Pediatrics, Father Muller Medical College and Hospital, Mangalore, India.
Girish SubramaniamColours Children Hospital, Nagpur, India.
Rajagopal KadavigereDepartment of Radiodiagnosis, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India.
Stephanie BielasDepartment of Human Genetics, University of Michigan Medical School, Ann Arbor, Michigan, USA.
Katta Mohan GirishaDepartment of Medical Genetics, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India.ORCID 0000-0002-0139-8239
Anju ShuklaDepartment of Medical Genetics, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India.ORCID 0000-0003-2471-4094
Manipal Academy of Higher Education · INLady Hardinge Medical College · INMangalore Institute of Oncology · INSir Ganga Ram Hospital · INAmrita Institute of Medical Sciences and Research Centre · INChild Development Center · QAFather Muller Medical College Hospital · INJaslok Hospital · INJawaharlal Nehru Medical College · INKing Edward Memorial Hospital and Seth G.S. Medical College · INK S Hegde Medical Academy · INMazumdar Shaw Medical Centre · INNagpur Institute of Technology · INPost Graduate Institute of Medical Education and Research · INUniversity of Michigan · US

Funding

Genetic Diagnosis of Neurodevelopmental Disorders in IndiaR01HD093570 · NICHD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BIELAS, STEPHANIE LEE · 2018 to 2024
$2.3M
Genetic Diagnosis of Heritable Neurodevelopmental Disorders with Exome SequencingR21NS094047 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BIELAS, STEPHANIE LEE · 2015 to 2016
$341k
NICHD NIH HHS R01 HD093570NINDS NIH HHS R21 NS094047
6 · The paper itself

Abstract

Genetic disorders with predominant central nervous system white matter abnormalities (CNS WMAs), also called leukodystrophies, are heterogeneous entities. We ascertained 117 individuals with CNS WMAs from 104 unrelated families. Targeted genetic testing was carried out in 16 families and 13 of them received a diagnosis. Chromosomal microarray (CMA) was performed for three families and one received a diagnosis. Mendeliome sequencing was used for testing 11 families and all received a diagnosis. Whole exome sequencing (WES) was performed in 80 families and was diagnostic in 52 (65%). Singleton WES was diagnostic for 50/75 (66.67%) families. Overall, genetic diagnoses were obtained in 77 families (74.03%). Twenty-two of 47 distinct disorders observed in this cohort have not been reported in Indian individuals previously. Notably, disorders of nuclear mitochondrial pathology were most frequent (9 disorders in 20 families). Thirty-seven of 75 (49.33%) disease-causing variants are novel. To sum up, the present cohort describes the phenotypic and genotypic spectrum of genetic disorders with CNS WMAs in our population. It demonstrates WES, especially singleton WES, as an efficient tool in the diagnosis of these heterogeneous entities. It also highlights possible founder events and recurrent disease-causing variants in our population and their implications on the testing strategy.

Indexed as

Genetic Association StudiesGenetic Predisposition to DiseaseAllelesChromosome AberrationsConsanguinityExome SequencingFamilyGenetic TestingHumansIndiaMicroarray AnalysisMutationNervous System MalformationsWhite Matterleukoencephalopathynext generation sequencingwhite matter diseasewhole exome sequencing

Identifiers

PMID34302356
PMCPMC8918360
OpenAlexW3183331168

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.