Evidence map›Paper›PMID 34302262›Full record

ArticleJournal of pharmacokinetics and pharmacodynamics2021

Delay differential equations based models in NONMEM.

Xiaoyu Yan, Robert Bauer, Gilbert Koch, Johannes Schropp, Juan Jose Perez Ruixo, Wojciech Krzyzanski

Abstract read
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In one paragraph

Article in Journal of pharmacokinetics and pharmacodynamics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Tutorial for Modeling Delays in Biological Systems in the NONMEM Software.CPT: pharmacometrics & systems pharmacology · 2025
    Article
  3. Article
  4. Computing optimal drug dosing with OptiDose: implementation in NONMEM.Journal of pharmacokinetics and pharmacodynamics · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 6 institutions in 5 countries.

Xiaoyu YanSchool of Pharmacy, Faculty of Medicine, The Chinese University of Hong Kong, Shatin, Hong Kong.
Robert BauerPharmacometrics R&D, ICON Clinical Research LLC, Gaithersburg, MD, USA.
Gilbert KochPediatric Pharmacology and Pharmacometrics, University Children's Hospital Basel UKBB, University of Basel, Basel, Switzerland.
Johannes SchroppDepartment of Mathematics and Statistics, University of Konstanz, Konstanz, Germany.
Juan Jose Perez RuixoJanssen R&D, a Division of Janssen Pharmaceutica NV, Beerse, Belgium.
Wojciech KrzyzanskiDepartment of Pharmaceutical Sciences, The State University of New York at Buffalo, Buffalo, NY, USA. wk@buffalo.edu.ORCID 0000-0001-9773-1739
Chinese University of Hong Kong · HKJanssen (Belgium) · BEPinnacle Clinical Research · USUniversity at Buffalo, State University of New York · USUniversity of Basel · CHUniversity of Konstanz · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Delay differential equations (DDEs) are commonly used in pharmacometric models to describe delays present in pharmacokinetic and pharmacodynamic data analysis. Several DDE solvers have been implemented in NONMEM 7.5 for the first time. Two of them are based on algorithms already applied elsewhere, while others are extensions of existing ordinary differential equations (ODEs) solvers. The purpose of this tutorial is to introduce basic concepts underlying DDE based models and to show how they can be developed using NONMEM. The examples include previously published DDE models such as logistic growth, tumor growth inhibition, indirect response with precursor pool, rheumatoid arthritis, and erythropoiesis-stimulating agents. We evaluated the accuracy of NONMEM DDE solvers, their ability to handle stiff problems, and their performance in parameter estimation using both first-order conditional estimation (FOCE) and the expectation-maximization (EM) method. NONMEM control streams and excerpts from datasets are provided for all discussed examples. All DDE solvers provide accurate and precise solutions with the number of significant digits controlled by the error tolerance parameters. For estimation of population parameters, the EM method is more stable than FOCE regardless of the DDE solver.

Indexed as

AlgorithmsModels, BiologicalComputer SimulationDDE solverDelay differential equationsNONMEMStiff differential equations

Identifiers

PMID34302262
OpenAlexW3186682234

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.