Evidence map›Paper›PMID 34299537›Full record

ArticleMolecules (Basel, Switzerland)2021

Metabolomic Analysis of The Chemical Diversity of South Africa Leaf Litter Fungal Species Using an Epigenetic Culture-Based Approach.

Rachel Serrano, Víctor González-Menéndez, Germán Martínez, Clara Toro, Jesús Martín, Olga Genilloud, José R Tormo

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Rachel SerranoFundación MEDINA, Av. Conocimiento 34, Health Sciences Technology Park, 18016 Granada, Spain.
Víctor González-MenéndezFundación MEDINA, Av. Conocimiento 34, Health Sciences Technology Park, 18016 Granada, Spain.ORCID 0000-0001-9859-6284
Germán MartínezFundación MEDINA, Av. Conocimiento 34, Health Sciences Technology Park, 18016 Granada, Spain.
Clara ToroFundación MEDINA, Av. Conocimiento 34, Health Sciences Technology Park, 18016 Granada, Spain.
Jesús MartínFundación MEDINA, Av. Conocimiento 34, Health Sciences Technology Park, 18016 Granada, Spain.
Olga GenilloudFundación MEDINA, Av. Conocimiento 34, Health Sciences Technology Park, 18016 Granada, Spain.ORCID 0000-0002-4202-1219
José R TormoFundación MEDINA, Av. Conocimiento 34, Health Sciences Technology Park, 18016 Granada, Spain.ORCID 0000-0001-6984-2941
Fundación Medina · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbial natural products are an invaluable resource for the biotechnological industry. Genome mining studies have highlighted the huge biosynthetic potential of fungi, which is underexploited by standard fermentation conditions. Epigenetic effectors and/or cultivation-based approaches have successfully been applied to activate cryptic biosynthetic pathways in order to produce the chemical diversity suggested in available fungal genomes. The addition of Suberoylanilide Hydroxamic Acid to fermentation processes was evaluated to assess its effect on the metabolomic diversity of a taxonomically diverse fungal population. Here, metabolomic methodologies were implemented to identify changes in secondary metabolite profiles to determine the best fermentation conditions. The results confirmed previously described effects of the epigenetic modifier on the metabolism of a population of 232 wide diverse South Africa fungal strains cultured in different fermentation media where the induction of differential metabolites was observed. Furthermore, one solid-state fermentation (BRFT medium), two classic successful liquid fermentation media (LSFM and YES) and two new liquid media formulations (MCKX and SMK-II) were compared to identify the most productive conditions for the different populations of taxonomic subgroups.

Indexed as

Biological ProductsBiosynthetic PathwaysBiotechnologyCulture MediaEpigenesis, GeneticFermentationFungiGenome, FungalMetabolomicsPlant LeavesSouth AfricaBiological ProductsCulture Mediachemical diversityepigenetic modifierfungal fermentationsmetabolomic

Identifiers

PMID34299537
PMCPMC8305139
OpenAlexW3179876229

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.