Evidence map›Paper›PMID 34299017›Full record

ArticleInternational journal of molecular sciences2021

Exploratory Metabolomic Analysis Based on Reversed-Phase Liquid Chromatography-Mass Spectrometry to Study an In Vitro Model of Hypoxia-Induced Metabolic Alterations in HK-2 Cells.

Samuel Bernardo-Bermejo, Elena Sánchez-López, Lei Tan, Selma Benito-Martínez, Zhengjin Jiang, María Castro-Puyana, Francisco Javier Lucio-Cazaña, María Luisa Marina

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Molecular Pathology, Diagnostics, and Therapeutics of Nephropathy.International journal of molecular sciences · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Samuel Bernardo-BermejoDepartamento de Química Analítica, Química Física e Ingeniería Química, Universidad de Alcalá, Ctra. Madrid-Barcelona Km. 33.600, 28871 Madrid, Spain.
Elena Sánchez-LópezDepartment of Human Genetics, Leiden University Medical Center, 2333 ZA Leiden, The Netherlands.ORCID 0000-0001-8546-766X
Lei TanDepartamento de Química Analítica, Química Física e Ingeniería Química, Universidad de Alcalá, Ctra. Madrid-Barcelona Km. 33.600, 28871 Madrid, Spain.
Selma Benito-MartínezDepartamento de Biología de Sistemas, Universidad de Alcalá, Ctra. Madrid-Barcelona Km. 33.600, 28871 Madrid, Spain.ORCID 0000-0002-3118-0564
Zhengjin JiangInstitute of Pharmaceutical Analysis, College of Pharmacy, Jinan University, Guangzhou 510632, China.
María Castro-PuyanaDepartamento de Química Analítica, Química Física e Ingeniería Química, Universidad de Alcalá, Ctra. Madrid-Barcelona Km. 33.600, 28871 Madrid, Spain.
Francisco Javier Lucio-CazañaDepartamento de Biología de Sistemas, Universidad de Alcalá, Ctra. Madrid-Barcelona Km. 33.600, 28871 Madrid, Spain.ORCID 0000-0001-9249-8501
María Luisa MarinaDepartamento de Química Analítica, Química Física e Ingeniería Química, Universidad de Alcalá, Ctra. Madrid-Barcelona Km. 33.600, 28871 Madrid, Spain.ORCID 0000-0002-5583-1624
Universidad de Alcalá · ESJinan University · CNLeiden University Medical Center · NL

Funding

Ministerio de Economía y Competitividad CTQ2016-76368-PMinisterio de Economía y Competitividad SAF2014-53218-R
6 · The paper itself

Abstract

Oxygen deficiency in cells, tissues, and organs can not only prevent the proper development of biological functions but it can also lead to several diseases and disorders. In this sense, the kidney deserves special attention since hypoxia can be considered an important factor in the pathophysiology of both acute kidney injury and chronic kidney disease. To provide better knowledge to unveil the molecular mechanisms involved, new studies are necessary. In this sense, this work aims to study, for the first time, an in vitro model of hypoxia-induced metabolic alterations in human proximal tubular HK-2 cells because renal proximal tubules are particularly susceptible to hypoxia. Different groups of cells, cultivated under control and hypoxia conditions at 0.5, 5, 24, and 48 h, were investigated using untargeted metabolomic approaches based on reversed-phase liquid chromatography-mass spectrometry. Both intracellular and extracellular fluids were studied to obtain a large metabolite coverage. On the other hand, multivariate and univariate analyses were carried out to find the differences among the cell groups and to select the most relevant variables. The molecular features identified as affected metabolites were mainly amino acids and Amadori compounds. Insights about their biological relevance are also provided.

Indexed as

Cell HypoxiaActivation, MetabolicCell LineChromatography, Reverse-PhaseEpithelial CellsHumansHypoxia-Inducible Factor 1, alpha SubunitIn Vitro TechniquesKidneyKidney Tubules, ProximalMetabolomeMetabolomicsMultivariate AnalysisPrincipal Component AnalysisTandem Mass SpectrometryHIF1A protein, humanHypoxia-Inducible Factor 1, alpha SubunitHK-2 cellshypoxialiquid chromatography–mass spectrometrymultivariate analysisuntargeted metabolomics

Identifiers

PMID34299017
PMCPMC8304667
OpenAlexW3181706691

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.