Evidence map›Paper›PMID 34298539›Full record

Trial reportPhysics in medicine and biology2021

Saliency-guided deep learning network for automatic tumor bed volume delineation in post-operative breast irradiation.

Mahdieh Kazemimoghadam, Weicheng Chi, Asal Rahimi, Nathan Kim, Prasanna Alluri, Chika Nwachukwu, Weiguo Lu, Xuejun Gu

Abstract readRandomized Controlled Trial
In one paragraph

Trial report in Physics in medicine and biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Mahdieh KazemimoghadamDepartment of Radiation Oncology, University of Texas Southwestern Medical Center, Dallas, TX, United States of America.ORCID 0000-0001-6561-647X
Weicheng ChiDepartment of Radiation Oncology, University of Texas Southwestern Medical Center, Dallas, TX, United States of America.ORCID 0000-0002-2284-8008
Asal RahimiDepartment of Radiation Oncology, University of Texas Southwestern Medical Center, Dallas, TX, United States of America.
Nathan KimDepartment of Radiation Oncology, University of Texas Southwestern Medical Center, Dallas, TX, United States of America.
Prasanna AlluriDepartment of Radiation Oncology, University of Texas Southwestern Medical Center, Dallas, TX, United States of America.
Chika NwachukwuDepartment of Radiation Oncology, University of Texas Southwestern Medical Center, Dallas, TX, United States of America.
Xuejun GuStanford University, Palo Alto, CA, United States of America.ORCID 0000-0001-6725-6906

Funding

An artificial intelligence-driven distributed stereotactic radiosurgery strategy for multiple brain metastases managementR01CA235723 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI GU, XUEJUN, LU, WEIGUO · 2019 to 2024
$2.9M
NCI NIH HHS R01 CA235723
6 · The paper itself

Abstract

Efficient, reliable and reproducible target volume delineation is a key step in the effective planning of breast radiotherapy. However, post-operative breast target delineation is challenging as the contrast between the tumor bed volume (TBV) and normal breast tissue is relatively low in CT images. In this study, we propose to mimic the marker-guidance procedure in manual target delineation. We developed a saliency-based deep learning segmentation (SDL-Seg) algorithm for accurate TBV segmentation in post-operative breast irradiation. The SDL-Seg algorithm incorporates saliency information in the form of markers' location cues into a U-Net model. The design forces the model to encode the location-related features, which underscores regions with high saliency levels and suppresses low saliency regions. The saliency maps were generated by identifying markers on CT images. Markers' location were then converted to probability maps using a distance transformation coupled with a Gaussian filter. Subsequently, the CT images and the corresponding saliency maps formed a multi-channel input for the SDL-Seg network. Our in-house dataset was comprised of 145 prone CT images from 29 post-operative breast cancer patients, who received 5-fraction partial breast irradiation (PBI) regimen on GammaPod. The 29 patients were randomly split into training (19), validation (5) and test (5) sets. The performance of the proposed method was compared against basic U-Net. Our model achieved mean (standard deviation) of 76.4(±2.7) %, 6.76(±1.83) mm, and 1.9(±0.66) mm for Dice similarity coefficient, 95 percentile Hausdorff distance, and average symmetric surface distance respectively on the test set with computation time of below 11 seconds per one CT volume. SDL-Seg showed superior performance relative to basic U-Net for all the evaluation metrics while preserving low computation cost. The findings demonstrate that SDL-Seg is a promising approach for improving the efficiency and accuracy of the on-line treatment planning procedure of PBI, such as GammaPod based PBI.

Indexed as

Deep LearningNeoplasmsBreastHumansImage Processing, Computer-AssistedRadiotherapy Planning, Computer-AssistedTumor Burdenbreast target segmentationmarker location cuespost-operative breast irradiationsaliency-based deep learning

Identifiers

PMID34298539
PMCPMC8639319

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.