Evidence map›Paper›PMID 34297924›Full record

ArticleCell2021

Virus-encoded histone doublets are essential and form nucleosome-like structures.

Yang Liu, Hugo Bisio, Chelsea Marie Toner, Sandra Jeudy, Nadege Philippe, Keda Zhou, Samuel Bowerman, Alison White, Garrett Edwards, Chantal Abergel and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
12.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 101 citations in OpenAlex.

  1. Review
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  11. Evolutionarily conserved grammar rules viral factories of amoeba-infecting members of the hyperdiverseProceedings of the National Academy of Sciences of the United States of America · 2025
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  16. Frontiers in microbiology · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Yang LiuDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO 80309, USA; Howard Hughes Medical Institute, University of Colorado Boulder, Boulder, CO 80309, USA.
Hugo BisioAix-Marseille University, Centre National de la Recherche Scientifique, Information Génomique & Structurale, Unité Mixte de Recherche 7256 (Institut de Microbiologie de la Méditerranée, FR3479, IM2B), 13288 Marseille Cedex 9, France.
Chelsea Marie TonerDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO 80309, USA.
Sandra JeudyAix-Marseille University, Centre National de la Recherche Scientifique, Information Génomique & Structurale, Unité Mixte de Recherche 7256 (Institut de Microbiologie de la Méditerranée, FR3479, IM2B), 13288 Marseille Cedex 9, France.
Nadege PhilippeAix-Marseille University, Centre National de la Recherche Scientifique, Information Génomique & Structurale, Unité Mixte de Recherche 7256 (Institut de Microbiologie de la Méditerranée, FR3479, IM2B), 13288 Marseille Cedex 9, France.
Keda ZhouDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO 80309, USA.
Samuel BowermanDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO 80309, USA.
Alison WhiteDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO 80309, USA.
Garrett EdwardsDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO 80309, USA.
Chantal AbergelAix-Marseille University, Centre National de la Recherche Scientifique, Information Génomique & Structurale, Unité Mixte de Recherche 7256 (Institut de Microbiologie de la Méditerranée, FR3479, IM2B), 13288 Marseille Cedex 9, France. Electronic address: chantal.abergel@igs.cnrs-mrs.fr.
Karolin LugerDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO 80309, USA; Howard Hughes Medical Institute, University of Colorado Boulder, Boulder, CO 80309, USA. Electronic address: karolin.luger@colorado.edu.
Nanyang Technological University · SGLaboratoire Information Génomique et Structurale · FRUniversity of Colorado Boulder · US

Funding

Characterizing Structure-Function Relationships in Archaeal-to-Eukaryotic Chromatin EvolutionF32GM137496 · NIGMS · UNIVERSITY OF COLORADO · PI BOWERMAN, SAMUEL · 2020 to 2020
$65k
Howard Hughes Medical InstituteNIGMS NIH HHS F32 GM137496
6 · The paper itself

Abstract

The organization of genomic DNA into defined nucleosomes has long been viewed as a hallmark of eukaryotes. This paradigm has been challenged by the identification of "minimalist" histones in archaea and more recently by the discovery of genes that encode fused remote homologs of the four eukaryotic histones in Marseilleviridae, a subfamily of giant viruses that infect amoebae. We demonstrate that viral doublet histones are essential for viral infectivity, localize to cytoplasmic viral factories after virus infection, and ultimately are found in the mature virions. Cryogenic electron microscopy (cryo-EM) structures of viral nucleosome-like particles show strong similarities to eukaryotic nucleosomes despite the limited sequence identify. The unique connectors that link the histone chains contribute to the observed instability of viral nucleosomes, and some histone tails assume structural roles. Our results further expand the range of "organisms" that require nucleosomes and suggest a specialized function of histones in the biology of these unusual viruses.

Indexed as

AmoebaDNA VirusesFluorescent DyesHistonesModels, MolecularNucleosomesProteomicsVirionFluorescent DyesHistonesNucleosomesacidic patchAnalytical Ultracentrifugationcryo-EMdoublet histonegiant virushistone tailKO fitness impactMelbournevirus geneticsNCLDVnon-eukaryotic nucleosomenucleosome-like-particleviral factoryviral nucleosome

Identifiers

PMID34297924
PMCPMC8357426
OpenAlexW3186079410

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.