Evidence map›Paper›PMID 34297326›Full record

ArticleDaru : journal of Faculty of Pharmacy, Tehran University of Medical Sciences2021

Exploring novel capping framework: high substituent pyridine-hydroxamic acid derivatives as potential antiproliferative agents.

Fernando Hernández-Borja, Itzel Mercado-Sánchez, Yolanda Alcaraz, Marco A García-Revilla, Clarisa Villegas Gómez, David Ordaz-Rosado, Nancy Santos-Martínez, Rocío García-Becerra, Miguel A Vazquez

Open access · greenAbstract read
In one paragraph

Article in Daru : journal of Faculty of Pharmacy, Tehran University of Medical Sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 10 citations in OpenAlex.

  1. Gain of Function (GOF) Mutant p53 in Cancer-Current Therapeutic Approaches.International journal of molecular sciences · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Fernando Hernández-BorjaDepartamento de Química, Universidad de Guanajuato, Guanajuato, Gto, 36050, México.
Itzel Mercado-SánchezDepartamento de Química, Universidad de Guanajuato, Guanajuato, Gto, 36050, México.
Yolanda AlcarazDepartamento de Farmacia, Universidad de Guanajuato, Guanajuato, Gto, 36050, México.
Marco A García-RevillaDepartamento de Química, Universidad de Guanajuato, Guanajuato, Gto, 36050, México.
Clarisa Villegas GómezDepartamento de Química, Universidad de Guanajuato, Guanajuato, Gto, 36050, México.
David Ordaz-RosadoDepartamento de Biología de la Reproducción Dr. Carlos Gual Castro, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, Ciudad de México, 14080, México.
Nancy Santos-MartínezDepartamento de Biología de la Reproducción Dr. Carlos Gual Castro, Instituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán, Ciudad de México, 14080, México.
Rocío García-BecerraDepartamento de Biología Molecular y Biotecnología, Instituto de Investigaciones Biomédicas, Universidad Nacional Autónoma de México, Ciudad de México, 04510, México.
Miguel A VazquezDepartamento de Química, Universidad de Guanajuato, Guanajuato, Gto, 36050, México. mvazquez@ugto.mx.ORCID http://orcid.org/0000-0002-2240-4669
Universidad de Guanajuato · MXInstituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán · MXUniversidad Nacional Autónoma de México · MX

Funding

Consejo Nacional de Ciencia y Tecnología 482137Consejo Nacional de Ciencia y Tecnología 673473Consejo Nacional de Ciencia y Tecnología A1-S-27694DAIP-Universidad de Guanajuato 034/2021; 131/2021Programa de Apoyo a Proyectos de Investigación e Innovación Tecnológica-PAPIIT IN208520
6 · The paper itself

Abstract

purposeHistone deacetylases (HDACs) play a vital role in the epigenetic regulation of gene expression due to their overexpression in several cancer forms. Therefore, these enzymes are considered as a potential anticancer drug target. Different synthetic and natural structures have been studied as HDACs inhibitors; based on available structural design information, the capping group is important for the biological activity due to the different interactions in the active site entrance. The present study aimed to analyze high substituted pyridine as a capping group, which included carrying out the synthesis, antiproliferative activity analysis, and docking studies of these novel compounds.

methodsTo achieve the synthesis of these derivatives, four reaction steps were performed, generating desired products 15a-k. Their effects on cell proliferation and gene expression of p21, cyclin D1, and p53 were determined using the sulphorhodamine B (SRB) method and quantitative real-time polymerase chain reaction. The HDAC1, HDAC6, and HDAC8 isoforms were used for performing docking experiments with our 15a-k products.

resultThe products 15a-k were obtained in overall yields of 40-71%. Compounds 15j and 15k showed the highest antiproliferative activity in the breast (BT-474 and MDA-MB-231) and prostate (PC3) cancer cell lines at a concentration of 10 µM. These compounds increased p21 mRNA levels and decreased cyclin D1 and p53 gene expression. The docking study showed an increment in the strength, and in the number of interactions performed by the capping moiety of the tested molecules compared with SAHA; interactions displayed are mainly van der Waals, π-stacking, and hydrogen bond.

conclusionThe synthesized compounds 2-thiophene (15j) and 2-furan (15k) pyridine displayed cell growth inhibition, regulation of genes related to cell cycle progression in highly metastatic cancer cell lines. The molecular coupling analysis performed with HDAC1, HDAC6 and HDAC8 showed an increment in the number of interactions performed by the capping moiety and consequently in the strength of the capping group interaction.

Indexed as

Breast NeoplasmsCell Line, TumorCell ProliferationCell SurvivalCyclin D1Cyclin-Dependent Kinase Inhibitor p21Dose-Response Relationship, DrugDrug Screening Assays, AntitumorEpigenesis, GeneticFemaleFuransGene Expression Regulation, NeoplasticHistone Deacetylase InhibitorsHumansMaleMolecular Docking SimulationCCND1 protein, humanCDKN1A protein, humanCyclin D1Cyclin-Dependent Kinase Inhibitor p21FuransHistone Deacetylase InhibitorspyridinePyridinesThiophenesTP53 protein, humanTumor Suppressor Protein p53Antiproliferative compoundsCapping frameworkDockingGene expressionHDACsHigh substituent pyridine

Identifiers

PMID34297326
PMCPMC8602590
OpenAlexW3186958072

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.