Evidence map›Paper›PMID 34297324›Full record

ArticleMolecular biology reports2021

pks

Carmina Villariba-Tolentino, Ana Maria Cariño, Kin Israel Notarte, Imee Macaranas, Allan Fellizar, Rock Christian Tomas, Lara Mae Angeles, Lorenzo Abanilla, Antonio Lim, Ma Kristina Carmela Aguilar and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular biology reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 8 citations in OpenAlex.

  1. Pooled it
  2. The Role of Zuo Jin Wan in Modulating the Tumor Microenvironment of Colorectal Cancer.Combinatorial chemistry & high throughput screening · 2025
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 7 institutions in 1 country.

Carmina Villariba-TolentinoThe Graduate School, University of Santo Tomas, 1015, Manila, Philippines.
Ana Maria CariñoThe Graduate School, University of Santo Tomas, 1015, Manila, Philippines.
Kin Israel NotarteFaculty of Medicine and Surgery, University of Santo Tomas, 1015, Manila, Philippines.
Imee MacaranasFaculty of Medicine and Surgery, University of Santo Tomas, 1015, Manila, Philippines.
Allan FellizarThe Graduate School, University of Santo Tomas, 1015, Manila, Philippines.
Rock Christian TomasUniversity of the Philippines Los Baños, 4031, Los Baños, Laguna, Philippines.
Lara Mae AngelesFaculty of Medicine and Surgery, University of Santo Tomas, 1015, Manila, Philippines.
Lorenzo AbanillaDivine Word Hospital, 6500, Tacloban, Philippines.
Antonio LimDivine Word Hospital, 6500, Tacloban, Philippines.
Ma Kristina Carmela AguilarThe Graduate School, University of Santo Tomas, 1015, Manila, Philippines.
Pia Marie AlbanoThe Graduate School, University of Santo Tomas, 1015, Manila, Philippines. psalbano@ust.edu.ph.ORCID http://orcid.org/0000-0002-5024-8819
University of Santo Tomas · PHHoly Name University · PHEnverga University · PHMariano Marcos State University · PHQuirino State University · PHUniversity of Santo Tomas Hospital · PHUniversity of the Philippines Los Baños · PH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSome E. coli strains that synthesize the toxin colibactin within the 54-kb pks island are being implicated in colorectal cancer (CRC) development. Here, the prevalence of pks METHODS AND

resultsA realtime qPCR protocol was developed to quantify uidA, clbB, clbN, and clbA genes in formalin fixed paraffin embedded colorectal tissues. The number of malignant tumors (44/62; 71%) positive for the uidA gene was not significantly different (p = 0.3428) from benign (38/62; 61%) tumors. Significantly higher number of benign samples (p < 0.05) were positive for all three colibactin genes (clbB, clbN, and clbA) compared with malignant samples. There was also higher prevalence of pks

conclusionHence, pks

Indexed as

Disease SusceptibilityColorectal NeoplasmsEscherichia coliEscherichia coli InfectionsEscherichia coli ProteinsHumansNeoplasm GradingNeoplasm StagingPeptidesPolyketidesPolymerase Chain ReactioncolibactinEscherichia coli ProteinsPeptidesPolyketidesclbAclbBclbNcolorectal cancerpks + E. coli

Identifiers

PMID34297324
OpenAlexW3180740274

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.