Evidence map›Paper›PMID 34292587›Full record

ArticleThe New phytologist2021

Genome-wide analysis of butterfly bush (Buddleja alternifolia) in three uplands provides insights into biogeography, demography and speciation.

Yong-Peng Ma, Hafiz Muhammad Wariss, Rong-Li Liao, Ren-Gang Zhang, Quan-Zheng Yun, Richard G Olmstead, John H Chau, Richard I Milne, Yves Van de Peer, Wei-Bang Sun

Abstract read
In one paragraph

Article in The New phytologist, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

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  9. The complete mitochondrial genome of an important medicinal plant,Mitochondrial DNA. Part B, Resources · 2025
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  10. Phylogeography ofEcology and evolution · 2024
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  11. Article
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  14. Article
  15. The complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2024
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yong-Peng MaYunnan Key Laboratory for Integrative Conservation of Plant Species with Extremely Small Populations, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China.ORCID 0000-0002-7725-3677
Hafiz Muhammad WarissYunnan Key Laboratory for Integrative Conservation of Plant Species with Extremely Small Populations, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China.
Rong-Li LiaoYunnan Key Laboratory for Integrative Conservation of Plant Species with Extremely Small Populations, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China.
Ren-Gang ZhangBeijing Ori-Gene Science and Technology Co. Ltd, Beijing, 102206, China.
Quan-Zheng YunBeijing Ori-Gene Science and Technology Co. Ltd, Beijing, 102206, China.
Richard G OlmsteadDepartment of Biology and Burke Museum, University of Washington, Box 351800, Seattle, WA, 98195, USA.
John H ChauCentre for Ecological Genomics and Wildlife Conservation, Department of Zoology, University of Johannesburg, PO Box 524, Auckland Park, 2006, South Africa.
Richard I MilneInstitute of Molecular Plant Sciences, University of Edinburgh, Edinburgh, EH9 3JH, UK.
Yves Van de PeerDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, B-9052, Belgium.ORCID 0000-0003-4327-3730
Wei-Bang SunYunnan Key Laboratory for Integrative Conservation of Plant Species with Extremely Small Populations, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Understanding processes that generate and maintain large disjunctions within plant species can provide valuable insights into plant diversity and speciation. The butterfly bush Buddleja alternifolia has an unusual disjunct distribution, occurring in the Himalaya, Hengduan Mountains (HDM) and the Loess Plateau (LP) in China. We generated a high-quality, chromosome-level genome assembly of B. alternifolia, the first within the family Scrophulariaceae. Whole-genome re-sequencing data from 48 populations plus morphological and petal colour reflectance data covering its full distribution range were collected. Three distinct genetic lineages of B. alternifolia were uncovered, corresponding to Himalayan, HDM and LP populations, with the last also differentiated morphologically and phenologically, indicating occurrence of allopatric speciation likely to be facilitated by geographic isolation and divergent adaptation to distinct ecological niches. Moreover, speciation with gene flow between populations from either side of a mountain barrier could be under way within LP. The current disjunctions within B. alternifolia might result from vicariance of a once widespread distribution, followed by several past contraction and expansion events, possibly linked to climate fluctuations promoted by the Kunlun-Yellow river tectonic movement. Several adaptive genes are likely to be either uniformly or diversely selected among regions, providing a footprint of local adaptations. These findings provide new insights into plant biogeography, adaptation and different processes of allopatric speciation.

Indexed as

BuddlejaDemographyEcosystemGene FlowGenetic SpeciationPhylogenyallopatric speciationdemographic historyKunlun-Yellow river tectonic movementLoess PlateauScrophulariaceaewhole-genome sequencing

Identifiers

PMID34292587
PMCPMC9291457

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.