Evidence map›Paper›PMID 34291734›Full record

ArticleJCI insight2021

Characterization of HNRNPA1 mutations defines diversity in pathogenic mechanisms and clinical presentation.

Danique Beijer, Hong Joo Kim, Lin Guo, Kevin O'Donovan, Inès Mademan, Tine Deconinck, Kristof Van Schil, Charlotte M Fare, Lauren E Drake, Alice F Ford and 16 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in JCI insight, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02450851 (Clinical and Genetic Evaluation of Patients With Undiagnosed Disorders Through the Undiagnosed Diseases Network), which is not on this map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02450851 recruitingnot on this map

Clinical and Genetic Evaluation of Patients With Undiagnosed Disorders Through the Undiagnosed Diseases Network

TypeobservationalSponsorNational Human Genome Research Institute (NHGRI)Ran2015 to 2028Enrolled20,000ConditionsGenetic Disease
3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 69 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 10 institutions in 4 countries.

Danique BeijerTranslational Neurosciences, Faculty of Medicine and Health Sciences, and.
Hong Joo KimDepartment of Cell and Molecular Biology, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Lin GuoDepartment of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Kevin O'DonovanDepartment of Cell and Molecular Biology, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Inès MademanTranslational Neurosciences, Faculty of Medicine and Health Sciences, and.
Tine DeconinckMedical Genetics, University of Antwerp and Antwerp University Hospital, Edegem, Belgium.
Kristof Van SchilMedical Genetics, University of Antwerp and Antwerp University Hospital, Edegem, Belgium.
Charlotte M FareDepartment of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Lauren E DrakeDepartment of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Alice F FordDepartment of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Andrzej KochańskiNeuromuscular Unit, Mossakowski Medical Research Centre, Polish Academy of Sciences, Warsaw, Poland.
Dagmara KabzińskaNeuromuscular Unit, Mossakowski Medical Research Centre, Polish Academy of Sciences, Warsaw, Poland.
Nicolas DubuissonNeuromuscular Reference Centre, University Hospitals St-Luc, University of Louvain, Brussels, Belgium.
Peter Van den BerghNeuromuscular Reference Centre, University Hospitals St-Luc, University of Louvain, Brussels, Belgium.
Nicol C VoermansDepartment of Neurology, Donders Institute for Brain, Cognition and Behaviour, Radboud University Medical Center, Nijmegen, Netherlands.
Richard Jlf LemmersHuman Genetics Department, Leiden University Medical Center, Netherlands.
Silvère M van der MaarelHuman Genetics Department, Leiden University Medical Center, Netherlands.
Devon BonnerStanford Center for Undiagnosed Diseases, Stanford University, Stanford, California, USA.
Jacinda B SampsonStanford Center for Undiagnosed Diseases, Stanford University, Stanford, California, USA.
Matthew T WheelerStanford Center for Undiagnosed Diseases, Stanford University, Stanford, California, USA.
Anahit MehrabyanDepartment of Neurology, School of Medicine, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.
Steven PalmerDepartment of Neurology, School of Medicine, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.
Peter De JongheTranslational Neurosciences, Faculty of Medicine and Health Sciences, and.
James ShorterDepartment of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
J Paul TaylorDepartment of Cell and Molecular Biology, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Jonathan BaetsTranslational Neurosciences, Faculty of Medicine and Health Sciences, and.
University of Antwerp · BEUniversity of Pennsylvania · USStanford University · USSt. Jude Children's Research Hospital · USCliniques Universitaires Saint-Luc · BELeiden University Medical Center · NLMossakowski Medical Research Institute, Polish Academy of Sciences · PLUniversity of North Carolina at Chapel Hill · USRadboud University Nijmegen · NLThomas Jefferson University · US

Funding

Training in Alzheimer’s and Age-Related Neurodegenerative DiseasesT32AG000255 · NIA · UNIVERSITY OF PENNSYLVANIA · PI ALICE S CHEN-PLOTKIN, VIRGINIA M LEE · 1997 to 2026
$12.5M
The Pathogenesis of Facioscapulohumeral Muscular DystrophyP01NS069539 · NINDS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI TAPSCOTT, STEPHEN J · 2010 to 2019
$12.3M
Stanford Center for Undiagnosed DiseasesU01HG007708 · NHGRI · STANFORD UNIVERSITY · PI ASHLEY, EUAN A, BERNSTEIN, JONATHAN ADAM · 2014 to 2018
$8.0M
Dynamic RNA-protein assemblies and neurological diseaseR35NS097974 · NINDS · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI TAYLOR, JOSEPH PAUL · 2017 to 2024
$7.2M
STRUCTURAL BIOLOGY TRAINING PROGRAMT32GM008275 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI WAND, A. JOSHUA · 1988 to 2018
$6.0M
Defining the mechanistic basis of a prion disaggregaseR01GM099836 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI SHORTER, JAMES · 2013 to 2024
$3.9M
Elucidating the Mechanism in the Regulation of RNA-binding Protein Phase SeparationR35GM138109 · NIGMS · THOMAS JEFFERSON UNIVERSITY · PI Lin Guo · 2020 to 2026
$2.6M
Engineering KapB2 to Disaggregate Disease-Linked ProteinsF31NS111870 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI FARE, CHARLOTTE MIRIAM · 2019 to 2021
$137k
Mechanisms and modifiers of hnRNPA1 and hnRNPA2 misfolding and toxicityF31NS087676 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI FORD, ALICE FLYNN · 2014 to 2016
$77k
NHGRI NIH HHS U01 HG007708NIA NIH HHS T32 AG000255NIGMS NIH HHS R01 GM099836NIGMS NIH HHS R35 GM138109NIGMS NIH HHS T32 GM008275NINDS NIH HHS F31 NS087676NINDS NIH HHS F31 NS111870NINDS NIH HHS P01 NS069539NINDS NIH HHS R35 NS097974
6 · The paper itself

Abstract

Mutations in HNRNPA1 encoding heterogeneous nuclear ribonucleoprotein (hnRNP) A1 are a rare cause of amyotrophic lateral sclerosis (ALS) and multisystem proteinopathy (MSP). hnRNPA1 is part of the group of RNA-binding proteins (RBPs) that assemble with RNA to form RNPs. hnRNPs are concentrated in the nucleus and function in pre-mRNA splicing, mRNA stability, and the regulation of transcription and translation. During stress, hnRNPs, mRNA, and other RBPs condense in the cytoplasm to form stress granules (SGs). SGs are implicated in the pathogenesis of (neuro-)degenerative diseases, including ALS and inclusion body myopathy (IBM). Mutations in RBPs that affect SG biology, including FUS, TDP-43, hnRNPA1, hnRNPA2B1, and TIA1, underlie ALS, IBM, and other neurodegenerative diseases. Here, we characterize 4 potentially novel HNRNPA1 mutations (yielding 3 protein variants: *321Eext*6, *321Qext*6, and G304Nfs*3) and 2 known HNRNPA1 mutations (P288A and D262V), previously connected to ALS and MSP, in a broad spectrum of patients with hereditary motor neuropathy, ALS, and myopathy. We establish that the mutations can have different effects on hnRNPA1 fibrillization, liquid-liquid phase separation, and SG dynamics. P288A accelerated fibrillization and decelerated SG disassembly, whereas *321Eext*6 had no effect on fibrillization but decelerated SG disassembly. By contrast, G304Nfs*3 decelerated fibrillization and impaired liquid phase separation. Our findings suggest different underlying pathomechanisms for HNRNPA1 mutations with a possible link to clinical phenotypes.

Indexed as

AdolescentAdultAmyotrophic Lateral SclerosisChildDNA Mutational AnalysisExome SequencingFemaleGenetic Association StudiesHeterogeneous Nuclear Ribonucleoprotein A1HeterozygoteHumansMaleMiddle AgedMuscular Atrophy, SpinalMutationPedigreeHeterogeneous Nuclear Ribonucleoprotein A1hnRNPA1 protein, humanCell stressGeneticsNeurological disordersNeuroscience

Identifiers

PMID34291734
PMCPMC8410042
OpenAlexW3186195866

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.