Evidence map›Paper›PMID 34290254›Full record

ArticleNature communications2021

Tracking single particles for hours via continuous DNA-mediated fluorophore exchange.

Florian Stehr, Johannes Stein, Julian Bauer, Christian Niederauer, Ralf Jungmann, Kristina Ganzinger, Petra Schwille

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 39 citations in OpenAlex.

  1. Review
  2. Article
  3. High-Speed Interferometric Scattering Tracking Microscopy of Compartmentalized Lipid Diffusion in Living Cells.Chemphyschem : a European journal of chemical physics and physical chemistry · 2025
    Article
  4. Cryosectioning-enhanced super-resolution microscopy for single-protein imaging across cells and tissues.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Bleaching-resistant, Near-continuous Single-molecule Fluorescence and FRET Based on Fluorogenic and Transient DNA Binding.Chemphyschem : a European journal of chemical physics and physical chemistry · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Florian Stehr *Max Planck Institute of Biochemistry, Martinsried, Germany.ORCID http://orcid.org/0000-0001-8571-8633
Johannes Stein *Max Planck Institute of Biochemistry, Martinsried, Germany.ORCID http://orcid.org/0000-0002-1335-1120
Julian BauerMax Planck Institute of Biochemistry, Martinsried, Germany.ORCID http://orcid.org/0000-0001-7110-3494
Christian NiederauerAMOLF, Amsterdam, The Netherlands.ORCID http://orcid.org/0000-0002-4383-887X
Ralf JungmannMax Planck Institute of Biochemistry, Martinsried, Germany.ORCID http://orcid.org/0000-0003-4607-3312
Kristina GanzingerAMOLF, Amsterdam, The Netherlands. k.ganzinger@amolf.nl.ORCID http://orcid.org/0000-0001-9106-9406
Petra SchwilleMax Planck Institute of Biochemistry, Martinsried, Germany. schwille@biochem.mpg.de.ORCID http://orcid.org/0000-0002-6106-4847
Max Planck Institute of Biochemistry · DEInstitute for Atomic and Molecular Physics · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Monitoring biomolecules in single-particle tracking experiments is typically achieved by employing fixed organic dyes or fluorescent fusion proteins linked to a target of interest. However, photobleaching typically limits observation times to merely a few seconds, restricting downstream statistical analysis and observation of rare biological events. Here, we overcome this inherent limitation via continuous fluorophore exchange using DNA-PAINT, where fluorescently-labeled oligonucleotides reversibly bind to a single-stranded DNA handle attached to the target molecule. Such versatile and facile labeling allows uninterrupted monitoring of single molecules for extended durations. We demonstrate the power of our approach by observing DNA origami on membranes for tens of minutes, providing perspectives for investigating cellular processes on physiologically relevant timescales.

Indexed as

DNAFluorescent DyesLipid BilayersMicroscopy, FluorescenceOligonucleotidesPhotobleachingSingle Molecule ImagingTime FactorsDNAFluorescent DyesLipid BilayersOligonucleotides

Identifiers

PMID34290254
PMCPMC8295357
OpenAlexW3184453886

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.