Evidence map›Paper›PMID 34290079›Full record

ArticleLife science alliance2021

Hepatitis B virus compartmentalization and single-cell differentiation in hepatocellular carcinoma.

Frank Jühling, Antonio Saviano, Clara Ponsolles, Laura Heydmann, Emilie Crouchet, Sarah C Durand, Houssein El Saghire, Emanuele Felli, Véronique Lindner, Patrick Pessaux and 4 more

Open access · goldAbstract read
In one paragraph

Article in Life science alliance, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

Frank JühlingUniversité de Strasbourg, Inserm, Institut de Recherche sur Les Maladies Virales et Hépatiques UMR_S1110, Strasbourg, France.ORCID 0000-0001-6373-2485
Antonio SavianoUniversité de Strasbourg, Inserm, Institut de Recherche sur Les Maladies Virales et Hépatiques UMR_S1110, Strasbourg, France.
Clara PonsollesUniversité de Strasbourg, Inserm, Institut de Recherche sur Les Maladies Virales et Hépatiques UMR_S1110, Strasbourg, France.
Laura HeydmannUniversité de Strasbourg, Inserm, Institut de Recherche sur Les Maladies Virales et Hépatiques UMR_S1110, Strasbourg, France.
Emilie CrouchetUniversité de Strasbourg, Inserm, Institut de Recherche sur Les Maladies Virales et Hépatiques UMR_S1110, Strasbourg, France.
Sarah C DurandUniversité de Strasbourg, Inserm, Institut de Recherche sur Les Maladies Virales et Hépatiques UMR_S1110, Strasbourg, France.
Houssein El SaghireUniversité de Strasbourg, Inserm, Institut de Recherche sur Les Maladies Virales et Hépatiques UMR_S1110, Strasbourg, France.
Emanuele FelliUniversité de Strasbourg, Inserm, Institut de Recherche sur Les Maladies Virales et Hépatiques UMR_S1110, Strasbourg, France.
Véronique LindnerHôpitaux Universitaires de Strasbourg, Département de Pathologie, Strasbourg, France.ORCID 0000-0001-5140-5321
Patrick PessauxUniversité de Strasbourg, Inserm, Institut de Recherche sur Les Maladies Virales et Hépatiques UMR_S1110, Strasbourg, France.
Nathalie PochetAnn Romney Center for Neurologic Diseases, Department of Neurology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
Catherine SchusterUniversité de Strasbourg, Inserm, Institut de Recherche sur Les Maladies Virales et Hépatiques UMR_S1110, Strasbourg, France.ORCID 0000-0001-7281-4511
Eloi R VerrierUniversité de Strasbourg, Inserm, Institut de Recherche sur Les Maladies Virales et Hépatiques UMR_S1110, Strasbourg, France e.verrier@unistra.fr.
Thomas F BaumertUniversité de Strasbourg, Inserm, Institut de Recherche sur Les Maladies Virales et Hépatiques UMR_S1110, Strasbourg, France thomas.baumert@unistra.fr.ORCID 0000-0002-8864-2168
Inserm · FRBroad Institute · USHôpitaux Universitaires de Strasbourg · FR

Funding

Project 2 - FranceU19AI123862 · NIAID · STANFORD UNIVERSITY · PI FOUNG, STEVEN · 2016 to 2020
$3.9M
Reverse-engineering precision liver cancer chemopreventionR01CA233794 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI HOSHIDA, YUJIN · 2019 to 2023
$3.5M
Integrative genomic framework for dissecting regulatory mechanisms underlying hepatocellular carcinomaR21CA209940 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI POCHET, NATHALIE · 2017 to 2018
$402k
Spatial and temporal profiling to unravel the host cell responses to hepatitis B virus infectionR03AI131066 · NIAID · BRIGHAM AND WOMEN'S HOSPITAL · PI POCHET, NATHALIE · 2018 to 2019
$181k
European Research Council 671231NCI NIH HHS R01 CA233794NCI NIH HHS R21 CA209940NIAID NIH HHS R03 AI131066NIAID NIH HHS U19 AI123862
6 · The paper itself

Abstract

Chronic hepatitis B virus (HBV) infection is a major cause of hepatocellular carcinoma (HCC) world-wide. The molecular mechanisms of viral hepatocarcinogenesis are still partially understood. Here, we applied two complementary single-cell RNA-sequencing protocols to investigate HBV-HCC host cell interactions at the single cell level of patient-derived HCC. Computational analyses revealed a marked HCC heterogeneity with a robust and significant correlation between HBV reads and cancer cell differentiation. Viral reads significantly correlated with the expression of HBV-dependency factors such as

Indexed as

Cell Transformation, ViralAdultAgedCarcinoma, HepatocellularCell DifferentiationCell Line, TumorDisease SusceptibilityFemaleGene Expression ProfilingGene Expression Regulation, ViralHepatitis BHepatitis B, ChronicHepatitis B virusHumansLiver NeoplasmsMaleRNA, Viral

Identifiers

PMID34290079
PMCPMC8321681
OpenAlexW3186678898

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.