ArticlePlant biotechnology journal2021
Exploring the diversity of promoter and 5'UTR sequences in ancestral, historic and modern wheat.
Article in Plant biotechnology journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.
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Who cites it
5 citing papers in PubMed.
- 40S ribosomal subunits move along the 5' UTR through an eIF4A-independent mechanism in higher eukaryotes.bioRxiv : the preprint server for biology · 2026Article
- Bioinformatics analysis and development of functional markers for TaMYB4-1A in wheat.PloS one · 2025Article
- Article
- A second-generation capture panel for cost-effective sequencing of genome regulatory regions in wheat and relatives.The plant genome · 2023Article
- Exploring the diversity of promoter and 5'UTR sequences in ancestral, historic and modern wheat.Plant biotechnology journal · 2021Article
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Authors and funding
4 authors.
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Abstract
A data set of promoter and 5'UTR sequences of homoeo-alleles of 459 wheat genes that contribute to agriculturally important traits in 95 ancestral and commercial wheat cultivars is presented here. The high-stringency myBaits technology used made individual capture of homoeo-allele promoters possible, which is reported here for the first time. Promoters of most genes are remarkably conserved across the 83 hexaploid cultivars used with <7 haplotypes per promoter and 21% being identical to the reference Chinese Spring. InDels and many high-confidence SNPs are located within predicted plant transcription factor binding sites, potentially changing gene expression. Most haplotypes found in the Watkins landraces and a few haplotypes found in Triticum monococcum, germplasms hitherto not thought to have been used in modern wheat breeding, are already found in many commercial hexaploid wheats. The full data set which is useful for genomic and gene function studies and wheat breeding is available at https://rrescloud.rothamsted.ac.uk/index.php/s/DMCFDu5iAGTl50u/authenticate.
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