Evidence map›Paper›PMID 34286912›Full record

ArticleMolecular systems biology2021

Tunable phenotypic variability through an autoregulatory alternative sigma factor circuit.

Christian P Schwall, Torkel E Loman, Bruno M C Martins, Sandra Cortijo, Casandra Villava, Vassili Kusmartsev, Toby Livesey, Teresa Saez, James C W Locke

Abstract read
In one paragraph

Article in Molecular systems biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
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  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Activation of the extracytoplasmic function σ factor σCurrent opinion in microbiology · 2022
    Review
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Christian P Schwall *Sainsbury Laboratory, University of Cambridge, Cambridge, UK.
Torkel E Loman *Sainsbury Laboratory, University of Cambridge, Cambridge, UK.
Bruno M C MartinsSainsbury Laboratory, University of Cambridge, Cambridge, UK.
Sandra CortijoSainsbury Laboratory, University of Cambridge, Cambridge, UK.
Casandra VillavaSainsbury Laboratory, University of Cambridge, Cambridge, UK.
Vassili KusmartsevSainsbury Laboratory, University of Cambridge, Cambridge, UK.
Toby LiveseySainsbury Laboratory, University of Cambridge, Cambridge, UK.
Teresa SaezSainsbury Laboratory, University of Cambridge, Cambridge, UK.
James C W LockeSainsbury Laboratory, University of Cambridge, Cambridge, UK.ORCID 0000-0003-0670-1943

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genetically identical individuals in bacterial populations can display significant phenotypic variability. This variability can be functional, for example by allowing a fraction of stress prepared cells to survive an otherwise lethal stress. The optimal fraction of stress prepared cells depends on environmental conditions. However, how bacterial populations modulate their level of phenotypic variability remains unclear. Here we show that the alternative sigma factor σ

Indexed as

Gene Expression Regulation, BacterialSigma FactorBacillus subtilisBacterial ProteinsBiological Variation, PopulationHomeostasisHumansOperonBacterial ProteinsSigma FactorBacillus subtilismicrobial systems biologysingle-cell time-lapse microscopystochastic gene expressionstress priming

Identifiers

PMID34286912
PMCPMC8287880

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.