Evidence map›Paper›PMID 34285912›Full record

ArticleBioMed research international2021

Comprehensive Profile Analysis of Differentially Expressed circRNAs in Glucose Deprivation-Induced Human Nucleus Pulposus Cell Degeneration.

Hongze Chang, Hongzhang Wang, Xiaolong Yang, Kemin You, Mingwei Jiang, Feng Cai, Yan Zhang, Liang Liu, Hui Liu, Xiaodong Liu

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Review
  6. Article
  7. Cytokine Imbalance as a Biomarker of Intervertebral Disk Degeneration.International journal of molecular sciences · 2023
    Review
  8. Circular RNAs: typical biomarkers for bone-related diseases.Journal of Zhejiang University. Science. B · 2022
    Article
  9. Review
  10. Immuno-Modulatory Effects of Intervertebral Disc Cells.Frontiers in cell and developmental biology · 2022
    Review
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Hongze ChangDepartment of Orthopedics, Yangpu Hospital, Tongji University School of Medicine, Shanghai 200090, China.
Hongzhang WangDepartment of Orthopedics, Yangpu Hospital, Tongji University School of Medicine, Shanghai 200090, China.
Xiaolong YangDepartment of Orthopedics, Yangpu Hospital, Tongji University School of Medicine, Shanghai 200090, China.
Kemin YouDepartment of Orthopedics, Yangpu Hospital, Tongji University School of Medicine, Shanghai 200090, China.
Mingwei JiangDepartment of Orthopedics, Yangpu Hospital, Tongji University School of Medicine, Shanghai 200090, China.
Feng CaiDepartment of Orthopedics, Yangpu Hospital, Tongji University School of Medicine, Shanghai 200090, China.
Yan ZhangDepartment of Orthopedics, Yangpu Hospital, Tongji University School of Medicine, Shanghai 200090, China.
Liang LiuDepartment of Orthopedics, Yangpu Hospital, Tongji University School of Medicine, Shanghai 200090, China.
Hui LiuDepartment of Orthopedics, Yangpu Hospital, Tongji University School of Medicine, Shanghai 200090, China.
Xiaodong LiuDepartment of Orthopedics, Yangpu Hospital, Tongji University School of Medicine, Shanghai 200090, China.ORCID https://orcid.org/0000-0001-8572-3643
Yangpu Hospital of Tongji University · CNTongji University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nucleus pulposus (NP) is the core substance to maintain the homeostasis of intervertebral disc and stability of biomechanics. The insufficient supply of nutrition (especially glucose) is an important factor that leads to the degeneration of NP cells. circRNAs play an important role in the process of intervertebral disc degeneration (IDD) by regulating the functions of NP cells. However, glucose deprivation-related circRNAs and their functions in IDD have not been reported. In this study, the differentially expressed circRNAs in NP cells after 0, 6, 12, and 24 h of glucose deprivation culture were detected by a microarray assay. Besides, time series clustering analysis by STEM software obtained the differentially up- and downregulated circRNAs during glucose deficiency. Then, the main functions and pathways of up- and downregulated circRNAs were predicted by the functional enrichment analysis. By constructing the circRNA-miRNA regulatory network, the potential mechanisms of the most differentially expressed circRNAs were predicted. In addition, according to in vitro validation, circ_0075062 was upregulated in degenerating NP tissues and glucose deprivation-induced NP cell degeneration. Based on Sanger sequencing and RNase tolerance assay, circ_0075062 was the circular transcript. Interfering with circ_0075062 expression could potentially alleviate the imbalance of extracellular matrix (ECM) synthesis and degradation in the NP cells induced by glucose deprivation. Together, these findings help us gain a comprehensive understanding of the underlying mechanisms of IDD, and circ_0075062 may be a promising therapeutic target of IDD.

Indexed as

Gene Expression ProfilingCluster AnalysisGene Expression RegulationGene Regulatory NetworksGlucoseHumansIntervertebral Disc DegenerationMicroRNAsNucleus PulposusRNA, CircularTime FactorsGlucoseMicroRNAsRNA, Circular

Identifiers

PMID34285912
PMCPMC8275381
OpenAlexW3179012883

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.