ArticleThe ISME journal2022
Seasonal niche differentiation among closely related marine bacteria.
Article in The ISME journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
41 citing papers in PubMed.
- Environmental disturbances and cyanobacterial traits shape prokaryotic dynamics in a eutrophic Mediterranean coastal lagoon.Environmental microbiome · 2026Article
- Metabolite interactions mediate beneficial alliances between Bacillus and Trichoderma for effective Fusarium wilt control.The ISME journal · 2026Article
- Ecological Processes Shaping Marine Microbial Assemblages Diverge Between Equatorial and Temperate Time-Series.Molecular ecology · 2026Article
- Microbial diversity in Pyrenean ice caves: extreme cryogenic environments as analogues for extraterrestrial habitability.FEMS microbes · 2026Article
- Ecology of prokaryotic DNA viruses in a highly impacted coastal lagoon revealed through comparative and temporal metagenomics.ISME communications · 2026Article
- A microbiologist's field guide to community ecology.ISME communications · 2026Review
- Oyster Aquaculture Impacts on Environment and Microbial Taxa in Dapeng Cove.Microorganisms · 2025Article
- Laser-modulated MnBiAnalytical and bioanalytical chemistry · 2025Article
- Microdiversity Shapes the Seasonal Niche of Prokaryotic Plankton Inhabiting Surface Waters in a Coastal Upwelling System.Environmental microbiology reports · 2025Article
- Multiple stressors affect function rather than taxonomic structure of freshwater microbial communities.NPJ biofilms and microbiomes · 2025Article
- Bacterial Community Composition and Its Relationship with Environmental Factors in the Artificial Reef Area for Marine Ranching in Changhai County.Animals : an open access journal from MDPI · 2025Article
- Seasonal recurrence and modular assembly of an Arctic pelagic marine microbiome.Nature communications · 2025Article
- Time-decay patterns and irregular disturbance: contrasting roles of abundant and rare microbial communities in dynamic coastal seawater.Applied and environmental microbiology · 2025Article
- A Multimarker Approach to Identify Microbial Bioindicators for Coral Reef Health Monitoring-Case Study in La Réunion Island.Microbial ecology · 2025Article
- Puzzling out the ecological niche construction for nitrogen fixers in a coastal upwelling system.ISME communications · 2025Article
- Microdiversity and fine-scale niche differentiation support persistence and coexistence of acidophiles in acid mine drainage.Frontiers in microbiology · 2025Article
- Temperature structuring of microbial communities on a global scale.Current opinion in microbiology · 2024Review
- Article
- Seasonal and interannual variability of the free-living and particle-associated bacteria of a coastal microbiome.Environmental microbiology reports · 2024Article
- Structure and composition of microbial communities in the water column from Southern Gulf of Mexico and detection of putative hydrocarbon-degrading microorganisms.Environmental microbiology reports · 2024Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
6 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Bacteria display dynamic abundance fluctuations over time in marine environments, where they play key biogeochemical roles. Here, we characterized the seasonal dynamics of marine bacteria in a coastal oligotrophic time series station, tested how similar the temporal niche of closely related taxa is, and what are the environmental parameters modulating their seasonal abundance patterns. We further explored how conserved the niche is at higher taxonomic levels. The community presented recurrent patterns of seasonality for 297 out of 6825 amplicon sequence variants (ASVs), which constituted almost half of the total relative abundance (47%). For certain genera, niche similarity decreased as nucleotide divergence in the 16S rRNA gene increased, a pattern compatible with the selection of similar taxa through environmental filtering. Additionally, we observed evidence of seasonal differentiation within various genera as seen by the distinct seasonal patterns of closely related taxa. At broader taxonomic levels, coherent seasonal trends did not exist at the class level, while the order and family ranks depended on the patterns that existed at the genus level. This study identifies the coexistence of closely related taxa for some bacterial groups and seasonal differentiation for others in a coastal marine environment subjected to a strong seasonality.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.