Evidence map›Paper›PMID 34285270›Full record

ArticleScientific reports2021

Transmission dynamics of a linear vanA-plasmid during a nosocomial multiclonal outbreak of vancomycin-resistant enterococci in a non-endemic area, Japan.

Yoshihiro Fujiya, Tetsuya Harada, Yo Sugawara, Yukihiro Akeda, Masako Yasuda, Ayako Masumi, Junichi Hayashi, Nobuhiro Tanimura, Yoshihiro Tsujimoto, Wataru Shibata and 6 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.0field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 27 citations in OpenAlex.

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  18. Distinguishing ClinicalAntibiotics (Basel, Switzerland) · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 1 country.

Yoshihiro FujiyaDepartment of Infection Control and Prevention, Graduate School of Medicine, Osaka University, Suita, Osaka, Japan.
Tetsuya HaradaDivision of Microbiology, Osaka Institute of Public Health, Osaka, Osaka, Japan.
Yo SugawaraResearch Institute for Microbial Diseases, Osaka University, Suita, Osaka, Japan.
Yukihiro AkedaDepartment of Infection Control and Prevention, Graduate School of Medicine, Osaka University, Suita, Osaka, Japan. akeda@biken.osaka-u.ac.jp.
Masako YasudaAijinkai Inoue Hospital, Suita, Osaka, Japan.
Ayako MasumiAijinkai Inoue Hospital, Suita, Osaka, Japan.
Junichi HayashiAijinkai Inoue Hospital, Suita, Osaka, Japan.
Nobuhiro TanimuraAijinkai Inoue Hospital, Suita, Osaka, Japan.
Yoshihiro TsujimotoAijinkai Inoue Hospital, Suita, Osaka, Japan.
Wataru ShibataDepartment of Infection Control Science, Graduate School of Medicine, Osaka City University, Osaka, Osaka, Japan.
Takahiro YamaguchiDivision of Microbiology, Osaka Institute of Public Health, Osaka, Osaka, Japan.
Ryuji KawaharaDivision of Microbiology, Osaka Institute of Public Health, Osaka, Osaka, Japan.
Isao NishiLaboratory for Clinical Investigation, Osaka University Hospital, Suita, Osaka, Japan.
Shigeyuki HamadaResearch Institute for Microbial Diseases, Osaka University, Suita, Osaka, Japan.
Kazunori TomonoDepartment of Infection Control and Prevention, Graduate School of Medicine, Osaka University, Suita, Osaka, Japan.
Hiroshi KakeyaDepartment of Infection Control Science, Graduate School of Medicine, Osaka City University, Osaka, Osaka, Japan.
Inoue Hospital · JPOsaka University · JPOsaka Prefectural Institute of Public Health · JPOsaka City University · JPOsaka University Hospital · JPSapporo Medical University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The spread of vancomycin-resistant enterococci (VRE) is a major threat in nosocomial settings. A large-scale multiclonal VRE outbreak has rarely been reported in Japan due to low VRE prevalence. We evaluated the transmission of vancomycin resistance in a multiclonal VRE outbreak, conducted biological and genomic analyses of VRE isolates, and assessed the implemented infection control measures. In total, 149 patients harboring VanA-type VRE were identified from April 2017 to October 2019, with 153 vancomycin-resistant Enterococcus faecium isolated being grouped into 31 pulsotypes using pulsed-field gel electrophoresis, wherein six sequence types belonged to clonal complex 17. Epidemic clones varied throughout the outbreak; however, they all carried vanA-plasmids (pIHVA). pIHVA is a linear plasmid, carrying a unique structural Tn1546 containing vanA; it moves between different Enterococcus spp. by genetic rearrangements. VRE infection incidence among patients in the "hot spot" ward correlated with the local VRE colonization prevalence. Local prevalence also correlated with vancomycin usage in the ward. Transmission of a novel transferrable vanA-plasmid among Enterococcus spp. resulted in genomic diversity in VRE in a non-endemic setting. The prevalence of VRE colonization and vancomycin usage at the ward level may serve as VRE cross-transmission indicators in non-intensive care units for outbreak control.

Indexed as

AgedAntimicrobial StewardshipBacterial ProteinsCarbon-Oxygen LigasesCase-Control StudiesCross InfectionDisease OutbreaksElectrophoresis, Gel, Pulsed-FieldEndemic DiseasesFemaleGram-Positive Bacterial InfectionsHumansJapanMalePhylogenyPlasmidsBacterial ProteinsCarbon-Oxygen LigasesVanA ligase, Bacteria

Identifiers

PMID34285270
PMCPMC8292306
OpenAlexW3185842826

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.