Evidence map›Paper›PMID 34285228›Full record

ArticleNature communications2021

Engineering self-organized criticality in living cells.

Blai Vidiella, Antoni Guillamon, Josep Sardanyés, Victor Maull, Jordi Pla, Nuria Conde, Ricard Solé

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
  3. 'Intelligent' proteins.Cellular and molecular life sciences : CMLS · 2025
    Review
  4. Article
  5. Review
  6. Open problems in synthetic multicellularity.NPJ systems biology and applications · 2024
    Article
  7. Article
  8. Toxin-based screening of C-terminal tags inbioRxiv : the preprint server for biology · 2024
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Blai VidiellaICREA-Complex Systems Lab, Universitat Pompeu Fabra, Barcelona, Spain.ORCID http://orcid.org/0000-0002-4819-7047
Antoni GuillamonDepartament de Matemàtiques, EPSEB, Universitat Politècnica de Catalunya, Barcelona, Spain.ORCID http://orcid.org/0000-0001-8268-4503
Josep SardanyésCentre de Recerca Matemàtica, Edifici C, Campus de Bellaterra, Barcelona, Spain.
Victor MaullICREA-Complex Systems Lab, Universitat Pompeu Fabra, Barcelona, Spain.
Jordi PlaICREA-Complex Systems Lab, Universitat Pompeu Fabra, Barcelona, Spain.ORCID http://orcid.org/0000-0003-2388-9407
Nuria CondeICREA-Complex Systems Lab, Universitat Pompeu Fabra, Barcelona, Spain. nuria.conde@upf.edu.ORCID http://orcid.org/0000-0001-5766-309X
Ricard SoléICREA-Complex Systems Lab, Universitat Pompeu Fabra, Barcelona, Spain. ricard.sole@upf.edu.ORCID http://orcid.org/0000-0001-6974-1008
Institució Catalana de Recerca i Estudis Avançats · ESCentre de Recerca Matemàtica · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Complex dynamical fluctuations, from intracellular noise, brain dynamics or computer traffic display bursting dynamics consistent with a critical state between order and disorder. Living close to the critical point has adaptive advantages and it has been conjectured that evolution could select these critical states. Is this the case of living cells? A system can poise itself close to the critical point by means of the so-called self-organized criticality (SOC). In this paper we present an engineered gene network displaying SOC behaviour. This is achieved by exploiting the saturation of the proteolytic degradation machinery in E. coli cells by means of a negative feedback loop that reduces congestion. Our critical motif is built from a two-gene circuit, where SOC can be successfully implemented. The potential implications for both cellular dynamics and behaviour are discussed.

Indexed as

Gene Expression Regulation, BacterialGenetic EngineeringCell EngineeringEscherichia coliEscherichia coli ProteinsFeedback, PhysiologicalModels, GeneticProteolysisSingle-Cell AnalysisEscherichia coli Proteins

Identifiers

PMID34285228
PMCPMC8292319
OpenAlexW3104787484

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.