Evidence map›Paper›PMID 34284772›Full record

ArticleBMC medical genomics2021

Molecular profiling of basal cell carcinomas in young patients.

Marc Abi Karam, Hampig Raphael Kourie, Nadine Jalkh, Cybel Mehawej, Carole Kesrouani, Fady Gh Haddad, Iman Feghaly, Eliane Chouery, Roland Tomb

Open access · goldAbstract read
In one paragraph

Article in BMC medical genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 29 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Functionalization of Nanomaterials for Skin Cancer Theranostics.Frontiers in bioengineering and biotechnology · 2022
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Marc Abi KaramFaculty of Medicine, Saint Joseph University, Beirut, Lebanon.
Hampig Raphael KourieMedical Genetics Unit, Faculty of Medicine, Saint Joseph University, Beirut, Lebanon. hampig.kourie@usj.edu.lb.
Nadine JalkhMedical Genetics Unit, Faculty of Medicine, Saint Joseph University, Beirut, Lebanon.
Cybel MehawejMedical Genetics Unit, Faculty of Medicine, Saint Joseph University, Beirut, Lebanon.
Carole KesrouaniMedical Genetics Unit, Faculty of Medicine, Saint Joseph University, Beirut, Lebanon.
Fady Gh HaddadHematology-Oncology Department, Faculty of Medicine, Saint Joseph University, Beirut, Lebanon.
Iman FeghalyFaculty of Medicine, Saint Joseph University, Beirut, Lebanon.
Eliane ChoueryMedical Genetics Unit, Faculty of Medicine, Saint Joseph University, Beirut, Lebanon.
Roland TombDermatology Department, Faculty of Medicine, Saint Joseph University, Beirut, Lebanon.
Saint Joseph University · LB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBasal cell carcinoma (BCC) represents by far the most common non-melanoma skin cancer (NMSC) in the world with an increasing incidence of 3% to 10% per year, especially in patients under the age of 40. While variants in the sonic Hedgehog and cell cycle regulation pathways account for the majority of BCC cases in adults, the molecular etiology of BCC in young patients is unelucidated yet. This study aims to investigate the molecular profile of BCC in the young population.

methods28 tumors belonging to 25 Lebanese patients under the age of 40, presenting different stages of BCC and diagnosed at Hôtel Dieu de France-Saint Joseph University Medical Center were included in this study. A selected panel of 150 genes involved in cancer was analyzed by Next Generation Sequencing (NGS) in the 28 included tumors.

resultsGenetic variants detected in more than 5% of the reads, with a sequencing depth ≥ 50x, were selected. Two hundred and two genetic variants in 48 different genes were detected, with an overall average sequencing depth of 1069x. Among the 28 studied tumors, 18 (64.3%) show variations in the PTCH1 gene, 6 (21.4%) in TP53 and 3 (10.7%) in SMO.

conclusionsThis is the first study reporting NGS-based analysis of BCC in a cohort of young patients. Our results highlight the involvement of the hedgehog and cell cycle regulation pathways in the genesis of BCC in the general population. The inclusion of a larger cohort of young patients is needed to confirm our findings.

Indexed as

Basal Cell CarcinomaSkin NeoplasmsAdultFemaleHigh-Throughput Nucleotide SequencingHumansMaleMutationYoung AdultBasal cell carcinomaNGSNMSCPTCH1TP53

Identifiers

PMID34284772
PMCPMC8293576
OpenAlexW3186242034

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.