Evidence map›Paper›PMID 34283913›Full record

ArticleThe journal of physical chemistry. B2021

Binding of Dipeptides to Fatty Acid Membranes Explains Their Colocalization in Protocells but Does Not Select for Them Relative to Unjoined Amino Acids.

Mengjun Xue, Roy A Black, Zachary R Cohen, Adrienne Roehrich, Gary P Drobny, Sarah L Keller

Abstract read
In one paragraph

Article in The journal of physical chemistry. B, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
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  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Mengjun XueDepartment of Chemistry, University of Washington, Seattle, Washington 98195 United States.ORCID 0000-0003-4832-4226
Roy A BlackDepartment of Chemistry, University of Washington, Seattle, Washington 98195 United States.ORCID 0000-0002-3914-5747
Zachary R CohenDepartment of Chemistry, University of Washington, Seattle, Washington 98195 United States.ORCID 0000-0002-1257-623X
Adrienne RoehrichDepartment of Chemistry, University of Washington, Seattle, Washington 98195 United States.
Gary P DrobnyDepartment of Chemistry, University of Washington, Seattle, Washington 98195 United States.ORCID 0000-0002-7293-1897
Sarah L KellerDepartment of Chemistry, University of Washington, Seattle, Washington 98195 United States.ORCID 0000-0001-5919-0185

Funding

Solution and Solid State NMR studies of Conformational Adaptation and Dynamics inR01GM109417 · NIGMS · UNIVERSITY OF WASHINGTON · PI DROBNY, GARY PETER · 2013 to 2016
$1.4M
NASA NNX17AK86GNIGMS NIH HHS R01 GM109417
6 · The paper itself

Abstract

Dipeptides, which consist of two amino acids joined by a peptide bond, have been shown to have catalytic functions. This observation leads to fundamental questions relevant to the origin of life. How could peptides have become colocalized with the first protocells? Which structural features would have determined the association of amino acids and peptides with membranes? Could the association of dipeptides with protocell membranes have driven molecular evolution, favoring dipeptides over individual amino acids? Using pulsed-field gradient nuclear magnetic resonance, we find that several prebiotic amino acids and dipeptides bind to prebiotic membranes. For amino acids, the side chains and carboxylate contribute to the interaction. For dipeptides, the extent of binding is generally less than that of the constituent amino acids, implying that other mechanisms would be necessary to drive molecular evolution. Nevertheless, our results are consistent with a scheme in which the building blocks of the biological polymers colocalized with protocells prior to the emergence of RNA and proteins.

Indexed as

Artificial CellsAmino AcidsDipeptidesFatty AcidsProteinsAmino AcidsDipeptidesFatty AcidsProteins

Identifiers

PMID34283913
PMCPMC8323988

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.