Evidence map›Paper›PMID 34283861›Full record

ArticlePloS one2021

Characterization of two closely related citrus cultivars using UPLC-ESI-MS/MS-based widely targeted metabolomics.

Fu Wang, Lin Chen, Shiwei Chen, Hongping Chen, Youping Liu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
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  10. FreshAntioxidants (Basel, Switzerland) · 2022
    Article
  11. Exogenous melatonin ameliorates drought stress inFrontiers in plant science · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Fu WangDepartment of Pharmacy, Standardization Education Ministry Key Laboratory of Traditional Chinese Medicine, Chengdu University of TCM, Chengdu, Sichuan, China.ORCID 0000-0002-9218-9167
Lin ChenDepartment of Pharmacy, Standardization Education Ministry Key Laboratory of Traditional Chinese Medicine, Chengdu University of TCM, Chengdu, Sichuan, China.
Shiwei ChenFood & Drugs Authority of Nanchong, Nanchong, Sichuan, China.
Hongping ChenDepartment of Pharmacy, Standardization Education Ministry Key Laboratory of Traditional Chinese Medicine, Chengdu University of TCM, Chengdu, Sichuan, China.
Youping LiuDepartment of Pharmacy, Standardization Education Ministry Key Laboratory of Traditional Chinese Medicine, Chengdu University of TCM, Chengdu, Sichuan, China.
Chengdu University of Traditional Chinese Medicine · CNChina National Pharmaceutical Group Corporation (China) · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Citrus cultivars are widely spread worldwide, and some of them only differ by specific mutations along the genome. It is difficult to distinguish them by traditional morphological identification. To accurately identify such similar cultivars, the subtle differences between them must be detected. In this study, UPLC-ESI-MS/MS-based widely targeted metabolomics analysis was conducted to study the chemical differences between two closely related citrus cultivars, Citrus reticulata 'DHP' and C. reticulata 'BZH'. Totally 352 metabolites including 11 terpenoids, 35 alkaloids, 80 phenolic acids, 25 coumarins, 7 lignans, 184 flavonoids and 10 other compounds were detected and identified; Among them, 15 metabolites are unique to DHP and 16 metabolites are unique to BZH. Hierarchical cluster analysis (HCA), principal component analysis (PCA), and orthogonal signal correction and partial least squares-discriminant analysis (OPLS-DA) can be used to clearly discriminate between DHP and BZH. 93 metabolites including 36 down-regulated and 57 up-regulated are significantly different in DHP and BZH. They are mainly involved in the biosynthesis of flavonoids, flavones, flavonols, and isoflavonoids. In addition, the relative content levels of flavonoids, alkaloids, and terpenoids are much higher in the peel of DHP than that of BZH, the presence of which may correlate with the quality difference of the peels. The results reported herein indicate that metabolite analysis based on UPLC-ESI-MS/MS is an effective means of identifying cultivars with different genotypes, especially those that cannot be distinguished based on traditional identification methods.

Indexed as

MetabolomicsAlkaloidsChromatography, High Pressure LiquidCitrusCluster AnalysisCoumarinsFlavonoidsHydroxybenzoatesMetabolomePrincipal Component AnalysisSpecies SpecificitySpectrometry, Mass, Electrospray IonizationTandem Mass SpectrometryAlkaloidsCoumarinsFlavonoidsHydroxybenzoatesphenolic acid

Identifiers

PMID34283861
PMCPMC8291699
OpenAlexW3185908097

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.