Evidence map›Paper›PMID 34282213›Full record

ArticleScientific reports2021

Single-cell transcriptomic profile of human pulmonary artery endothelial cells in health and pulmonary arterial hypertension.

Kewal Asosingh, Suzy Comhair, Lori Mavrakis, Weiling Xu, Dean Horton, Ian Taylor, Svyatoslav Tkachenko, Bo Hu, Serpil Erzurum

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 48 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Endothelial Heterogeneity in Pulmonary Hypertension.Arteriosclerosis, thrombosis, and vascular biology · 2026
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Bone morphogenetic protein-9 controls pulmonary vascular growth and remodeling.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  13. Lung endothelial cell heterogeneity in health and pulmonary vascular disease.American journal of physiology. Lung cellular and molecular physiology · 2025
    Review
  14. Review
  15. Review
  16. Review
  17. Review
  18. Article
  19. Deciphering the Complexities of Pulmonary Hypertension: The Emergent Role of Single-Cell Omics.American journal of respiratory cell and molecular biology · 2025
    Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Kewal AsosinghDepartments of Inflammation and Immunity, Lerner Research Institute and Respiratory Institute, Cleveland Clinic, 9500 Euclid Ave, NB20, Cleveland, OH, 44195, USA. asosink@ccf.org.
Suzy ComhairDepartments of Inflammation and Immunity, Lerner Research Institute and Respiratory Institute, Cleveland Clinic, 9500 Euclid Ave, NB20, Cleveland, OH, 44195, USA.
Lori MavrakisDepartments of Inflammation and Immunity, Lerner Research Institute and Respiratory Institute, Cleveland Clinic, 9500 Euclid Ave, NB20, Cleveland, OH, 44195, USA.
Weiling XuDepartments of Inflammation and Immunity, Lerner Research Institute and Respiratory Institute, Cleveland Clinic, 9500 Euclid Ave, NB20, Cleveland, OH, 44195, USA.
Dean HortonDepartments of Genomics Core, Lerner Research Institute and Respiratory Institute, Cleveland Clinic, Cleveland, OH, USA.
Ian TaylorBD Life Sciences: Informatics, Ashland, OR, USA.
Svyatoslav TkachenkoDepartments of Quantitative Health Sciences, Lerner Research Institute and Respiratory Institute, Cleveland Clinic, Cleveland, OH, USA.
Bo HuDepartments of Quantitative Health Sciences, Lerner Research Institute and Respiratory Institute, Cleveland Clinic, Cleveland, OH, USA.
Serpil ErzurumDepartments of Inflammation and Immunity, Lerner Research Institute and Respiratory Institute, Cleveland Clinic, 9500 Euclid Ave, NB20, Cleveland, OH, 44195, USA. erzurus@ccf.org.
Cleveland Clinic Lerner College of Medicine · USAshland (United States) · US

Funding

NITRIC OXIDE PRODUCTION AND REACTIONS IN THE LUNGR01HL060917 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI Serpil C. Erzurum · 1999 to 2026
$6.3M
Nitric Oxide in Pulmonary HypertensionR37HL060917 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI ERZURUM, SERPIL C. · 2009 to 2018
$3.9M
NHLBI NIH HHS HL060917NHLBI NIH HHS R01 HL060917NHLBI NIH HHS R37 HL060917
6 · The paper itself

Abstract

Pulmonary arterial hypertension (PAH) is an insidious disease characterized by severe remodeling of the pulmonary vasculature caused in part by pathologic changes of endothelial cell functions. Although heterogeneity of endothelial cells across various vascular beds is well known, the diversity among endothelial cells in the healthy pulmonary vascular bed and the pathologic diversity among pulmonary arterial endothelial cells (PAEC) in PAH is unknown and previously unexplored. Here single-cell RNA sequencing technology was used to decipher the cellular heterogeneity among PAEC in the human pulmonary arteries isolated from explanted lungs from three patients with PAH undergoing lung transplantation and three healthy donor lungs not utilized for transplantation. Datasets of 36,368 PAH individual endothelial cells and 36,086 healthy cells were analyzed using the SeqGeq bioinformatics program. Total population differential gene expression analyses identified 629 differentially expressed genes between PAH and controls. Gene Ontology and Canonical Ingenuity analysis revealed pathways that are known to be involved in pathogenesis, as well as unique new pathways. At the individual cell level, dimensionality reduction followed by density based clustering revealed the presence of eight unique PAEC clusters that were typified by proliferative, angiogenic or quiescent phenotypes. While control and PAH harbored many similar subgroups of endothelial cells, PAH had greater proportions of angiogenic and proliferative subsets. These findings identify that only specific subgroups of PAH PAEC have gene expression different than healthy PAEC, and suggest these subpopulations lead to the pathologic functions leading to remodeling.

Indexed as

AdultCase-Control StudiesCells, CulturedEndothelial CellsFemaleGene Expression ProfilingHumansLungPulmonary Arterial HypertensionPulmonary ArterySingle-Cell AnalysisTranscriptome

Identifiers

PMID34282213
PMCPMC8289993
OpenAlexW3183231115

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.