Evidence map›Paper›PMID 34282208›Full record

ArticleScientific reports2021

An integrated machine learning framework for a discriminative analysis of schizophrenia using multi-biological data.

Peng-Fei Ke, Dong-Sheng Xiong, Jia-Hui Li, Zhi-Lin Pan, Jing Zhou, Shi-Jia Li, Jie Song, Xiao-Yi Chen, Gui-Xiang Li, Jun Chen and 4 more

Abstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
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  9. Assisting schizophrenia diagnosis using clinical electroencephalography and interpretable graph neural networks: a real-world and cross-site study.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2023
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  14. Adjustment ofFrontiers in genetics · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Peng-Fei KeDepartment of Biomedical Engineering, School of Material Science and Engineering, South China University of Technology, Guangzhou, 510006, Guangdong, China.
Dong-Sheng XiongDepartment of Biomedical Engineering, School of Material Science and Engineering, South China University of Technology, Guangzhou, 510006, Guangdong, China.
Jia-Hui LiDepartment of Biomedical Engineering, School of Material Science and Engineering, South China University of Technology, Guangzhou, 510006, Guangdong, China.
Zhi-Lin PanDepartment of Biomedical Engineering, School of Material Science and Engineering, South China University of Technology, Guangzhou, 510006, Guangdong, China.
Jing ZhouDepartment of Biomedical Engineering, School of Material Science and Engineering, South China University of Technology, Guangzhou, 510006, Guangdong, China.
Shi-Jia LiDepartment of Biomedical Engineering, School of Material Science and Engineering, South China University of Technology, Guangzhou, 510006, Guangdong, China.
Jie SongDepartment of Biomedical Engineering, School of Material Science and Engineering, South China University of Technology, Guangzhou, 510006, Guangdong, China.
Xiao-Yi ChenDepartment of Biomedical Engineering, School of Material Science and Engineering, South China University of Technology, Guangzhou, 510006, Guangdong, China.
Gui-Xiang LiGuangdong Engineering Technology Research Center for Diagnosis and Rehabilitation of Dementia, Guangzhou, 510500, China.
Jun ChenGuangdong Engineering Technology Research Center for Diagnosis and Rehabilitation of Dementia, Guangzhou, 510500, China.
Xiao-Bo LiDepartment of Biomedical Engineering, New Jersey Institute of Technology, Newark, NJ, USA.
Yu-Ping NingThe Affiliated Brain Hospital of Guangzhou Medical University, Guangzhou Huiai Hospital, Guangzhou, 510370, Guangdong, China.
Feng-Chun WuThe Affiliated Brain Hospital of Guangzhou Medical University, Guangzhou Huiai Hospital, Guangzhou, 510370, Guangdong, China. 13580380071@163.com.
Kai WuDepartment of Biomedical Engineering, School of Material Science and Engineering, South China University of Technology, Guangzhou, 510006, Guangdong, China. kaiwu@scut.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Finding effective and objective biomarkers to inform the diagnosis of schizophrenia is of great importance yet remains challenging. Relatively little work has been conducted on multi-biological data for the diagnosis of schizophrenia. In this cross-sectional study, we extracted multiple features from three types of biological data, including gut microbiota data, blood data, and electroencephalogram data. Then, an integrated framework of machine learning consisting of five classifiers, three feature selection algorithms, and four cross validation methods was used to discriminate patients with schizophrenia from healthy controls. Our results show that the support vector machine classifier without feature selection using the input features of multi-biological data achieved the best performance, with an accuracy of 91.7% and an AUC of 96.5% (p < 0.05). These results indicate that multi-biological data showed better discriminative capacity for patients with schizophrenia than single biological data. The top 5% discriminative features selected from the optimal model include the gut microbiota features (Lactobacillus, Haemophilus, and Prevotella), the blood features (superoxide dismutase level, monocyte-lymphocyte ratio, and neutrophil count), and the electroencephalogram features (nodal local efficiency, nodal efficiency, and nodal shortest path length in the temporal and frontal-parietal brain areas). The proposed integrated framework may be helpful for understanding the pathophysiology of schizophrenia and developing biomarkers for schizophrenia using multi-biological data.

Indexed as

AlgorithmsAdultBiomarkersBlood Cell CountBlood Chemical AnalysisCase-Control StudiesChinaCross-Sectional StudiesDatabases, FactualDiagnosis, DifferentialDiscriminant AnalysisElectroencephalographyFecesFemaleGastrointestinal MicrobiomeHumansBiomarkers

Identifiers

PMID34282208
PMCPMC8290033

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.