Evidence map›Paper›PMID 34282134›Full record

ArticleNature communications2021

Structures of ABCG2 under turnover conditions reveal a key step in the drug transport mechanism.

Qin Yu, Dongchun Ni, Julia Kowal, Ioannis Manolaridis, Scott M Jackson, Henning Stahlberg, Kaspar P Locher

Abstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed.

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  19. Cadmium transport by mammalian ATP-binding cassette transporters.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Qin YuInstitute of Molecular Biology and Biophysics, Department of Biology, ETH Zürich, Zürich, Switzerland.ORCID 0000-0001-9265-632X
Dongchun NiCenter for Cellular Imaging and NanoAnalytics (C-CINA), Biozentrum, University of Basel, Basel, Switzerland.
Julia KowalInstitute of Molecular Biology and Biophysics, Department of Biology, ETH Zürich, Zürich, Switzerland.ORCID 0000-0003-4694-1896
Ioannis ManolaridisInstitute of Molecular Biology and Biophysics, Department of Biology, ETH Zürich, Zürich, Switzerland.
Scott M JacksonInstitute of Molecular Biology and Biophysics, Department of Biology, ETH Zürich, Zürich, Switzerland.
Henning StahlbergCenter for Cellular Imaging and NanoAnalytics (C-CINA), Biozentrum, University of Basel, Basel, Switzerland.ORCID 0000-0002-1185-4592
Kaspar P LocherInstitute of Molecular Biology and Biophysics, Department of Biology, ETH Zürich, Zürich, Switzerland. locher@mol.biol.ethz.ch.ORCID 0000-0002-8207-2889

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

ABCG2 is a multidrug transporter that affects drug pharmacokinetics and contributes to multidrug resistance of cancer cells. In previously reported structures, the reaction cycle was halted by the absence of substrates or ATP, mutation of catalytic residues, or the presence of small-molecule inhibitors or inhibitory antibodies. Here we present cryo-EM structures of ABCG2 under turnover conditions containing either the endogenous substrate estrone-3-sulfate or the exogenous substrate topotecan. We find two distinct conformational states in which both the transport substrates and ATP are bound. Whereas the state turnover-1 features more widely separated NBDs and an accessible substrate cavity between the TMDs, turnover-2 features semi-closed NBDs and an almost fully occluded substrate cavity. Substrate size appears to control which turnover state is mainly populated. The conformational changes between turnover-1 and turnover-2 states reveal how ATP binding is linked to the closing of the cytoplasmic side of the TMDs. The transition from turnover-1 to turnover-2 is the likely bottleneck or rate-limiting step of the reaction cycle, where the discrimination of substrates and inhibitors occurs.

Indexed as

Pharmaceutical PreparationsAdenosine TriphosphatasesATP Binding Cassette Transporter, Subfamily G, Member 2Biological TransportCryoelectron MicroscopyDrug Resistance, MultipleDrug Resistance, NeoplasmHumansMembrane ProteinsNeoplasm ProteinsProtein DomainsABCG2 protein, humanAdenosine TriphosphatasesATP Binding Cassette Transporter, Subfamily G, Member 2Membrane ProteinsNeoplasm ProteinsPharmaceutical Preparations

Identifiers

PMID34282134
PMCPMC8289821

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.