Evidence map›Paper›PMID 34282029›Full record

ArticleCancer discovery2021

Genetic Screens Identify a Context-Specific PI3K/p27Kip1 Node Driving Extrahepatic Biliary Cancer.

Chiara Falcomatà, Stefanie Bärthel, Angelika Ulrich, Sandra Diersch, Christian Veltkamp, Lena Rad, Fabio Boniolo, Myriam Solar, Katja Steiger, Barbara Seidler and 24 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer discovery, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 19 citations in OpenAlex.

  1. Guideline
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  9. Cell genomics · 2023
    Article
  10. Article
  11. Selecting an Appropriate Experimental Animal Model for Cholangiocarcinoma Research.Journal of clinical and translational hepatology · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

34 authors at 7 institutions in 2 countries.

Chiara Falcomatà *Division of Translational Cancer Research, German Cancer Research Center (DKFZ) and German Cancer Consortium (DKTK), Heidelberg, Germany.ORCID 0000-0001-9269-2582
Stefanie Bärthel *Division of Translational Cancer Research, German Cancer Research Center (DKFZ) and German Cancer Consortium (DKTK), Heidelberg, Germany.ORCID 0000-0001-5986-4864
Angelika Ulrich *Division of Translational Cancer Research, German Cancer Research Center (DKFZ) and German Cancer Consortium (DKTK), Heidelberg, Germany.
Sandra DierschDepartment of Internal Medicine II, Klinikum rechts der Isar, Technische Universität München, Munich, Germany.
Christian VeltkampDivision of Translational Cancer Research, German Cancer Research Center (DKFZ) and German Cancer Consortium (DKTK), Heidelberg, Germany.
Lena RadDivision of Translational Cancer Research, German Cancer Research Center (DKFZ) and German Cancer Consortium (DKTK), Heidelberg, Germany.
Fabio BonioloDivision of Translational Cancer Research, German Cancer Research Center (DKFZ) and German Cancer Consortium (DKTK), Heidelberg, Germany.
Myriam SolarCancer Research UK Beatson Institute, Glasgow, United Kingdom.
Katja SteigerInstitute of Pathology, Klinikum rechts der Isar, Technische Universität München, München, Germany.ORCID 0000-0002-7269-5433
Barbara SeidlerDivision of Translational Cancer Research, German Cancer Research Center (DKFZ) and German Cancer Consortium (DKTK), Heidelberg, Germany.
Magdalena ZukowskaDivision of Translational Cancer Research, German Cancer Research Center (DKFZ) and German Cancer Consortium (DKTK), Heidelberg, Germany.
Joanna MadejDivision of Translational Cancer Research, German Cancer Research Center (DKFZ) and German Cancer Consortium (DKTK), Heidelberg, Germany.
Mingsong WangDivision of Translational Cancer Research, German Cancer Research Center (DKFZ) and German Cancer Consortium (DKTK), Heidelberg, Germany.
Rupert ÖllingerCenter for Translational Cancer Research (TranslaTUM), School of Medicine, Technical University of Munich, Munich, Germany.ORCID 0000-0002-2292-5982
Roman MareschCenter for Translational Cancer Research (TranslaTUM), School of Medicine, Technical University of Munich, Munich, Germany.ORCID 0000-0003-3393-8882
Maxim BarenboimGerman Cancer Consortium (DKTK), Heidelberg, Germany.
Stefan EserDivision of Translational Cancer Research, German Cancer Research Center (DKFZ) and German Cancer Consortium (DKTK), Heidelberg, Germany.
Markus TschurtschenthalerDivision of Translational Cancer Research, German Cancer Research Center (DKFZ) and German Cancer Consortium (DKTK), Heidelberg, Germany.ORCID 0000-0002-0060-4790
Arianeb MehrabiDepartment of Surgery, Universität Heidelberg, Heidelberg, Germany.ORCID 0000-0001-6163-1525
Stephanie RoesslerInstitute of Pathology, Universität Heidelberg, Heidelberg, Germany.ORCID 0000-0002-5333-5942
Benjamin GoeppertInstitute of Pathology, Universität Heidelberg, Heidelberg, Germany.
Alexander KindLivestock Biotechnology, Technische Universität München, Freising, Germany.
Angelika SchniekeLivestock Biotechnology, Technische Universität München, Freising, Germany.
Maria S RoblesInstitute of Medical Psychology, Faculty of Medicine, LMU Munich, Munich, Germany.ORCID 0000-0001-9149-8761
Allan BradleyWellcome Trust Sanger Institute, Genome Campus, Hinxton-Cambridge, United Kingdom.
Roland M SchmidDepartment of Internal Medicine II, Klinikum rechts der Isar, Technische Universität München, Munich, Germany.
Marc Schmidt-SupprianCenter for Translational Cancer Research (TranslaTUM), School of Medicine, Technical University of Munich, Munich, Germany.
Maximilian ReichertDepartment of Internal Medicine II, Klinikum rechts der Isar, Technische Universität München, Munich, Germany.
Wilko WeichertInstitute of Pathology, Klinikum rechts der Isar, Technische Universität München, München, Germany.
Owen J SansomCancer Research UK Beatson Institute, Glasgow, United Kingdom.ORCID 0000-0001-9540-3010
Jennifer P MortonCancer Research UK Beatson Institute, Glasgow, United Kingdom.ORCID 0000-0001-5766-9141
Roland Rad *Center for Translational Cancer Research (TranslaTUM), School of Medicine, Technical University of Munich, Munich, Germany.
Günter Schneider *Department of Internal Medicine II, Klinikum rechts der Isar, Technische Universität München, Munich, Germany.ORCID 0000-0003-1840-4508
Dieter Saur *Division of Translational Cancer Research, German Cancer Research Center (DKFZ) and German Cancer Consortium (DKTK), Heidelberg, Germany.ORCID 0000-0001-5874-0210
German Cancer Research Center · DECancer Research UK Scotland Institute · GBHeidelberg University · DETechnical University of Munich · DETUM Klinikum · DELMU Klinikum · DEWellcome Sanger Institute · GB

Funding

Cancer Research UK 21139Cancer Research UK 29996Cancer Research UK A17196Cancer Research UK A21139European Research Council 648521
6 · The paper itself

Abstract

Biliary tract cancer ranks among the most lethal human malignancies, representing an unmet clinical need. Its abysmal prognosis is tied to an increasing incidence and a fundamental lack of mechanistic knowledge regarding the molecular basis of the disease. Here, we show that the Pdx1-positive extrahepatic biliary epithelium is highly susceptible toward transformation by activated PIK3CAH1047R but refractory to oncogenic KrasG12D. Using genome-wide transposon screens and genetic loss-of-function experiments, we discover context-dependent genetic interactions that drive extrahepatic cholangiocarcinoma (ECC) and show that PI3K signaling output strength and repression of the tumor suppressor p27Kip1 are critical context-specific determinants of tumor formation. This contrasts with the pancreas, where oncogenic Kras in concert with p53 loss is a key cancer driver. Notably, inactivation of p27Kip1 permits KrasG12D-driven ECC development. These studies provide a mechanistic link between PI3K signaling, tissue-specific tumor suppressor barriers, and ECC pathogenesis, and present a novel genetic model of autochthonous ECC and genes driving this highly lethal tumor subtype. SIGNIFICANCE: We used the first genetically engineered mouse model for extrahepatic bile duct carcinoma to identify cancer genes by genome-wide transposon-based mutagenesis screening. Thereby, we show that PI3K signaling output strength and p27Kip1 function are critical determinants for context-specific ECC formation. This article is highlighted in the In This Issue feature, p. 2945.

Indexed as

Bile Duct NeoplasmsBiliary Tract NeoplasmsAnimalsBile Ducts, IntrahepaticGenes, Tumor SuppressorHumansMicePhosphatidylinositol 3-Kinases

Identifiers

PMID34282029
PMCPMC7612573
OpenAlexW3185421922

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.