Evidence map›Paper›PMID 34281524›Full record

ArticleBMC genomics2021

Identification of QTL related to anther color and hull color by RAD sequencing in a RIL population of Setaria italica.

Huifang Xie, Junliang Hou, Nan Fu, Menghan Wei, Yunfei Li, Kang Yu, Hui Song, Shiming Li, Jinrong Liu

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Huifang Xie *Anyang Academy of Agriculture Sciences, 455000, Anyang, Henan, China.
Junliang Hou *BGI Institute of Applied Agriculture, BGI-Shenzhen, 518120, Shenzhen, Guangdong, China.
Nan FuAnyang Academy of Agriculture Sciences, 455000, Anyang, Henan, China.
Menghan WeiAnyang Academy of Agriculture Sciences, 455000, Anyang, Henan, China.
Yunfei LiBGI Institute of Applied Agriculture, BGI-Shenzhen, 518120, Shenzhen, Guangdong, China.
Kang YuBGI Institute of Applied Agriculture, BGI-Shenzhen, 518120, Shenzhen, Guangdong, China.
Hui SongAnyang Academy of Agriculture Sciences, 455000, Anyang, Henan, China.
Shiming LiBGI Institute of Applied Agriculture, BGI-Shenzhen, 518120, Shenzhen, Guangdong, China. lishiming1215@qq.com.
Jinrong LiuAnyang Academy of Agriculture Sciences, 455000, Anyang, Henan, China. liujinrong63@163.com.
Anyang Academy of Agricultural Sciences · CNBGI Group (China) · CN

Funding

Lifting Project of Young talents in Henan Province 2021HYTP035Modern industrial technology system in Henan Province Z2020-14-01National Key Research and Development Program of China 2019YFD1000708special funds for Science, Technology, Innovation and Industrial Development of Shenzhen Dapeng New District KJYF202001-11Special project for the construction of technological system of modern agricultural industry CARS-07-13.5-A18
6 · The paper itself

Abstract

backgroundFoxtail millet (Setaria italica) is one of the oldest domesticated crops and has been considered as an ideal model plant for C

resultsQuantitative trait loci (QTL) analysis for anther color and hull color was conducted using 400 F

conclusionsThis work presents the related QTL and candidate genes of anther and hull color in foxtail millet and developed a new method named inconsistent rate analysis to detect the chromosome fragments linked with the quality trait in RILs. This is the first study of the QTL related to hull color in foxtail millet and clarifying that the CAD gene (Seita.1G057300.v2.2) is the key gene responsible for this trait. It lays the foundation for further cloning of the functional genes and provides a powerful tool to detect the chromosome fragments linked with quality traits in RILs.

Indexed as

Setaria PlantChromosome MappingHigh-Throughput Nucleotide SequencingPolymorphism, Single NucleotideQuantitative Trait LociSequence Analysis, DNAAnther colorcinnamyl alcohol dehydrogenase (CAD) geneFoxtail millet (Setaria italica)Hull colorInconsistent rate analysisQuantitative trait loci (QTL)Restriction site-associated DNA sequencing (RADseq)

Identifiers

PMID34281524
PMCPMC8290542
OpenAlexW3183220189

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.