ArticleeLife2021
Highly contiguous assemblies of 101 drosophilid genomes.
Erratum issuedAbstract read
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Article in eLife, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 149 papers.
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149citing papers in PubMed
–field-weighted citation impact
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
149 citing papers in PubMed.
- Targeted integration of extrachromosomal arrays inScience advances · 2026Article
- Draft hybrid assembly and annotation of the Drosophila palustris and Drosophila subpalustris genomes.G3 (Bethesda, Md.) · 2026Article
- T2T genomes ofGenome research · 2026Article
- Retention of a single Cenp-C gene in different syntenic locations in the montium group of Drosophila species.Heredity · 2026Article
- Convergence and conflict among telomere-specialized transposons across 60 million years of Drosophilid evolution.Genome research · 2026Article
- Lifestyles ofProceedings of the National Academy of Sciences of the United States of America · 2026Article
- Chromosomal fusions shaped the genome of the greater hornwrack bryozoan (Flustra foliacea) (Linnaeus, 1758).The Journal of heredity · 2026Article
- Article
- Spiroplasma Are Protective Heritable Symbionts With Low Physiological Impact in the Drosophilid Fly Zaprionus kolodkinae.Environmental microbiology reports · 2026Article
- Evolutionary rate correlations reveal long-term co-evolutionary interactions inbioRxiv : the preprint server for biology · 2026Article
- Manual validation finds ultra-long-read sequencing best enables faithful, population-level structural variant calling in Drosophila melanogaster euchromatin with nanopore.G3 (Bethesda, Md.) · 2026Article
- Negative allometry of egg size among 29 species of drosophilid flies.bioRxiv : the preprint server for biology · 2026Article
- Transposable elements contribute to the evolution of host shift-related genes in cactophilicGenome research · 2026Article
- The Evolutionary Flexibility of the Drosophila Circadian Clock: Network Constraints or Adaptive Freedom?Genome biology and evolution · 2026Article
- Male sterility in Drosophila hybrids revealed by a multi-generational transcriptomic analysis of genes and transposable elements in testes.BMC biology · 2026Article
- Adaptive evolution of Topoisomerase II triggers reproductive isolation in Drosophila.bioRxiv : the preprint server for biology · 2026Article
- Germline de novo mutation rate of the highly heterozygous amphioxus genome.Molecular biology and evolution · 2026Article
- Sex-biased Expression of Genes and Transposable Elements in Hybrids from Drosophila mojavensis and Drosophila arizonae.Genome biology and evolution · 2026Article
- Dynamics of genome evolution in the era of pangenome analysis.Cell genomics · 2026Review
- Inferring fungal cis-regulatory networks from genome sequences via unsupervised and interpretable representation learning.Genetics · 2026Article
89 more citing papers are in PubMed but not listed here.
Corrections and comments
- Erratum issued
Authors and funding
39 authors.
Bernard Y Kim *Department of Biology, Stanford University, Stanford, United States.ORCID https://orcid.org/0000-0002-5025-1292
Jeremy R Wang *Department of Genetics, University of North Carolina, Chapel Hill, United States.ORCID https://orcid.org/0000-0002-0673-9418
Danny E MillerDepartment of Pediatrics, Division of Genetic Medicine, University of Washington and Seattle Children's Hospital, Seattle, United States.
Olga BarminaDepartment of Evolution and Ecology, University of California Davis, Davis, United States.
Emily DelaneyDepartment of Evolution and Ecology, University of California Davis, Davis, United States.ORCID https://orcid.org/0000-0003-3609-5702
Ammon ThompsonDepartment of Evolution and Ecology, University of California Davis, Davis, United States.
Aaron A ComeaultSchool of Natural Sciences, Bangor University, Bangor, United Kingdom.ORCID http://orcid.org/0000-0003-3954-2416
David PeedeBiology Department, University of North Carolina, Chapel Hill, United States.ORCID http://orcid.org/0000-0002-4826-0464
Emmanuel R R D'AgostinoBiology Department, University of North Carolina, Chapel Hill, United States.
Julianne PelaezDepartment of Integrative Biology, University of California, Berkeley, Berkeley, United States.
Jessica M AguilarDepartment of Integrative Biology, University of California, Berkeley, Berkeley, United States.
Diler HajiDepartment of Integrative Biology, University of California, Berkeley, Berkeley, United States.
Teruyuki MatsunagaDepartment of Integrative Biology, University of California, Berkeley, Berkeley, United States.ORCID http://orcid.org/0000-0002-6433-622X
Ellie E ArmstrongDepartment of Biology, Stanford University, Stanford, United States.
Molly ZychMolecular and Cellular Biology Program, University of Washington, Seattle, United States.
Yoshitaka OgawaDepartment of Biological Sciences, Tokyo Metropolitan University, Hachioji, Japan.
Marina Stamenković-RadakFaculty of Biology, University of Belgrade, Belgrade, Serbia.
Mihailo JelićFaculty of Biology, University of Belgrade, Belgrade, Serbia.ORCID http://orcid.org/0000-0002-1637-0933
Marija Savić VeselinovićFaculty of Biology, University of Belgrade, Belgrade, Serbia.
Marija TanaskovićUniversity of Belgrade, Institute for Biological Research "Siniša Stanković", National Institute of Republic of Serbia, Belgrade, Serbia.
Pavle ErićUniversity of Belgrade, Institute for Biological Research "Siniša Stanković", National Institute of Republic of Serbia, Belgrade, Serbia.ORCID http://orcid.org/0000-0002-0053-1982
Jian-Jun GaoSchool of Ecology and Environmental Science, Yunnan University, Kunming, China.
Takehiro K KatohSchool of Ecology and Environmental Science, Yunnan University, Kunming, China.
Masanori J TodaHokkaido University Museum, Hokkaido University, Sapporo, Japan.ORCID http://orcid.org/0000-0003-0158-1858
Hideaki WatabeBiological Laboratory, Sapporo College, Hokkaido University of Education, Sapporo, Japan.
Masayoshi WatadaGraduate School of Science and Engineering, Ehime University, Matsuyama, Japan.
Jeremy S DavisDepartment of Biology, University of Kentucky, Lexington, United States.
Leonie C MoyleDepartment of Biology, Indiana University, Bloomington, United States.
Giulia ManoliNeurobiology and Genetics, Theodor Boveri Institute, Biocentre, University of Würzburg, Würzburg, Germany.
Enrico BertoliniNeurobiology and Genetics, Theodor Boveri Institute, Biocentre, University of Würzburg, Würzburg, Germany.
Vladimír KošťálInstitute of Entomology, Biology Centre, Academy of Sciences of the Czech Republic, Prague, Czech Republic.
R Scott HawleyDepartment of Molecular and Integrative Physiology, University of Kansas Medical Center, Stowers Institute for Medical Research, Kansas City, United States.
Aya TakahashiDepartment of Biological Sciences, Tokyo Metropolitan University, Hachioji, Japan.ORCID http://orcid.org/0000-0002-8391-7417
Corbin D JonesBiology Department, University of North Carolina, Chapel Hill, United States.
Donald K PriceSchool of Life Science, University of Nevada, Las Vegas, United States.
Noah WhitemanDepartment of Integrative Biology, University of California, Berkeley, Berkeley, United States.ORCID https://orcid.org/0000-0003-1448-4678
Artyom KoppDepartment of Evolution and Ecology, University of California Davis, Davis, United States.ORCID http://orcid.org/0000-0001-5224-0741
Daniel R Matute *Biology Department, University of North Carolina, Chapel Hill, United States.
Dmitri A Petrov *Department of Biology, Stanford University, Stanford, United States.ORCID https://orcid.org/0000-0002-3664-9130
Funding
Genomics of rapid adaptation in the lab and in the wildR35GM118165 · NIGMS · STANFORD UNIVERSITY · PI Dmitri Petrov · 2016 to 2026
$8.3MGenetic Dissection of Cells and Organisms Training ProgramT32GM132022 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI Nicole King, NOAH K WHITEMAN · 2019 to 2026
$5.2MCo-evolutionary Genetics of Host-Parasite InteractionsR35GM119816 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI NOAH K WHITEMAN · 2016 to 2026
$4.7MMolecular Genetics of Evolutionary InnovationsR35GM122592 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI ARTYOM KOPP · 2017 to 2026
$4.5MThe prevalence of genetic introgression in speciationR01GM121750 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MATUTE, DANIEL · 2017 to 2021
$1.7MPredoctoral Training Program in Biological Data Science at Brown UniversityT32GM128596 · NIGMS · BROWN UNIVERSITY · PI RAMACHANDRAN, SOHINI, SANDSTEDE, BJORN · 2018 to 2022
$1.5MAn experimental test of hybrid speciationR01GM125715 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MATUTE, DANIEL · 2020 to 2022
$891kAdvanced sequencing as a novel diagnostic tool to discover strain-level variation and function of mucosal-adherent bacteria contributing to IBDK01DK119582 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI WANG, JEREMY R · 2019 to 2023
$754kA comparative population genomic approach for high-resolution inference of natural selection in fruit fliesF32GM135998 · NIGMS · STANFORD UNIVERSITY · PI KIM, BERNARD YOUNGSOO · 2020 to 2021
$131kNIDDK NIH HHS K01 DK119582NIGMS NIH HHS F32 GM135998NIGMS NIH HHS R01 GM121750NIGMS NIH HHS R01 GM125715NIGMS NIH HHS R35 GM118165NIGMS NIH HHS R35 GM119816NIGMS NIH HHS R35 GM122592NIGMS NIH HHS T32 GM128596NIGMS NIH HHS T32 GM132022
Abstract
Over 100 years of studies in
Indexed as
Genome SizeAnimalsCell LineChromosomesComputational BiologyDrosophila melanogasterFemaleGenomeGenomicsHigh-Throughput Nucleotide SequencingNanoporescomparative genomicsD. melanogasterDrosophilaDrosophilidaeevolutionary biologygeneticsgenome assemblygenomicslong readsnanopore
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.