ArticleFrontiers in plant science2021
The Conservation of Chloroplast Genome Structure and Improved Resolution of Infrafamilial Relationships of Crassulaceae.
Article in Frontiers in plant science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.
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26 citing papers in PubMed, 44 citations in OpenAlex.
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- Pan-Plastome Analysis Reveals the Genetic Diversity and Genetic Divergence ofInternational journal of molecular sciences · 2025Article
- A phoenix in the greenhouse: characterization and phylogenomics of complete chloroplast genomes sheds light on the putatively extinct-in-the-wild Solanum ensifolium (Solanaceae).BMC plant biology · 2025Article
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- Complete Chloroplast Genome ofGenes · 2024Article
- Phylogenomics and plastomics offer new evolutionary perspectives on Kalanchoideae (Crassulaceae).Annals of botany · 2024Article
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- Exploring Plastomic Resources inGenes · 2024Article
- Kazakhstan tulips: comparative analysis of complete chloroplast genomes of four local and endangered species of the genusFrontiers in plant science · 2024Article
- Comparative chloroplast genomes: insights into the identification and phylogeny of rapid radiation genusFrontiers in plant science · 2024Article
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- The complete chloroplast genome sequences of six Hylotelephium species: Comparative genomic analysis and phylogenetic relationships.PloS one · 2023Article
- New insights into the phylogenetic relationships among wild onions (Frontiers in plant science · 2023Article
- Insights into taxonomy and phylogenetic relationships of elevenFrontiers in plant science · 2023Article
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- Comparative and phylogenetic analysis based on chloroplast genome of Heteroplexis (Compositae), a protected rare genus.BMC plant biology · 2022Article
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Authors and funding
6 authors at 2 institutions in 1 country.
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No grant is acknowledged in the PubMed record.
Abstract
Crassulaceae are the largest family in the angiosperm order Saxifragales. Species of this family are characterized by succulent leaves and a unique photosynthetic pathway known as Crassulacean acid metabolism (CAM). Although the inter- and intrageneric relationships have been extensively studied over the last few decades, the infrafamilial relationships of Crassulaceae remain partially obscured. Here, we report nine newly sequenced chloroplast genomes, which comprise several key lineages of Crassulaceae. Our comparative analyses and positive selection analyses of Crassulaceae species indicate that the overall gene organization and function of the chloroplast genome are highly conserved across the family. No positively selected gene was statistically supported in Crassulaceae lineage using likelihood ratio test (LRT) based on branch-site models. Among the three subfamilies of Crassulaceae, our phylogenetic analyses of chloroplast protein-coding genes support Crassuloideae as sister to Kalanchoideae plus Sempervivoideae. Furthermore, within Sempervivoideae, our analyses unambiguously resolved five clades that are successively sister lineages, i.e., Telephium clade, Sempervivum clade, Aeonium clade, Leucosedum clade, and Acre clade. Overall, this study enhances our understanding of the infrafamilial relationships and the conservation of chloroplast genomes within Crassulaceae.
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