Evidence map›Paper›PMID 34273601›Full record

ArticleCells & development2021

3D viscoelastic drag forces contribute to cell shape changes during organogenesis in the zebrafish embryo.

Paula C Sanematsu, Gonca Erdemci-Tandogan, Himani Patel, Emma M Retzlaff, Jeffrey D Amack, M Lisa Manning

Abstract read
In one paragraph

Article in Cells & development, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Dynamic forces drive cell and organ morphology changes during embryonic development.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Dand5 is involved in zebrafish tailbud cell movement.Frontiers in cell and developmental biology · 2022
    Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Paula C SanematsuDepartment of Physics and BioInspired Syracuse: Institute for Material and Living Systems, Syracuse University, Syracuse, NY, USA.
Gonca Erdemci-TandoganDepartment of Physics and BioInspired Syracuse: Institute for Material and Living Systems, Syracuse University, Syracuse, NY, USA.
Himani PatelDepartment of Cell and Developmental Biology, State University of New York Upstate Medical University, Syracuse, NY, USA, 13210.
Emma M RetzlaffDepartment of Cell and Developmental Biology, State University of New York Upstate Medical University, Syracuse, NY, USA, 13210.
Jeffrey D AmackDepartment of Cell and Developmental Biology, State University of New York Upstate Medical University, Syracuse, NY, USA, 13210.
M Lisa ManningDepartment of Physics and BioInspired Syracuse: Institute for Material and Living Systems, Syracuse University, Syracuse, NY, USA. Electronic address: mmanning@syr.edu.

Funding

Four-dimensional prediction and quantification of how physical forces impact organogenesis in zebrafishR01HD099031 · NICHD · SYRACUSE UNIVERSITY · PI AMACK, JEFFREY D, MANNING, MARY ELIZABETH LISA · 2020 to 2024
$2.1M
Quantitative Modeling of Cell Shape Changes During OrganogenesisR01GM117598 · NIGMS · SYRACUSE UNIVERSITY · PI MANNING, MARY ELIZABETH LISA · 2015 to 2018
$1.0M
NICHD NIH HHS R01 HD099031NIGMS NIH HHS R01 GM117598
6 · The paper itself

Abstract

The left-right organizer in zebrafish embryos, Kupffer's Vesicle (KV), is a simple organ that undergoes programmed asymmetric cell shape changes that are necessary to establish the left-right axis of the embryo. We use simulations and experiments to investigate whether 3D mechanical drag forces generated by the posteriorly-directed motion of the KV through the tailbud tissue are sufficient to drive such shape changes. We develop a fully 3D vertex-like (Voronoi) model for the tissue architecture, and demonstrate that the tissue can generate drag forces and drive cell shape changes. Furthermore, we find that tailbud tissue presents a shear-thinning, viscoelastic behavior consistent with those observed in published experiments. We then perform live imaging experiments and particle image velocimetry analysis to quantify the precise tissue velocity gradients around KV as a function of developmental time. We observe robust velocity gradients around the KV, indicating that mechanical drag forces must be exerted on the KV by the tailbud tissue. We demonstrate that experimentally observed velocity fields are consistent with the viscoelastic response seen in simulations. This work also suggests that 3D viscoelastic drag forces could be a generic mechanism for cell shape change in other biological processes.

Indexed as

Body PatterningZebrafishAnimalsCell ShapeCiliaOrganogenesisCell shapeLeft-right asymmetryOrganogenesisParticle image velocimetryTissue mechanicsVertex model

Identifiers

PMID34273601
PMCPMC8758797

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.