Evidence map›Paper›PMID 34273561›Full record

ArticleGenomics, proteomics & bioinformatics2022

SLM2 Is A Novel Cardiac Splicing Factor Involved in Heart Failure due to Dilated Cardiomyopathy.

Jes-Niels Boeckel, Maximilian Möbius-Winkler, Marion Müller, Sabine Rebs, Nicole Eger, Laura Schoppe, Rewati Tappu, Karoline E Kokot, Jasmin M Kneuer, Susanne Gaul and 12 more

Open access · goldAbstract read
In one paragraph

Article in Genomics, proteomics & bioinformatics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
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  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Posttranscriptional Regulation by Proteins and Noncoding RNAs.Advances in experimental medicine and biology · 2024
    Article
  11. Titin: roles in cardiac function and diseases.Frontiers in physiology · 2024
    Review
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 3 institutions in 1 country.

Jes-Niels BoeckelDepartment of Cardiology, Angiology and Pneumology, University Hospital Heidelberg, D-69120 Heidelberg, Germany; Klinik und Poliklinik für Kardiologie, Universitätskrankenhaus Leipzig, D-04103 Leipzig, Germany.
Maximilian Möbius-WinklerKlinik und Poliklinik für Kardiologie, Universitätskrankenhaus Leipzig, D-04103 Leipzig, Germany.
Marion MüllerDepartment of Cardiology, Angiology and Pneumology, University Hospital Heidelberg, D-69120 Heidelberg, Germany; German Center for Cardiovascular Research (DZHK), Partner site Heidelberg, D-69120 Heidelberg, Germany; Clinic for General and Interventional Cardiology/Angiology, Herz- und Diabeteszentrum NRW, Ruhr-Universität Bochum, D-32545 Bad Oeynhausen, Germany.
Sabine RebsDepartment of Cardiology and Pneumology, University Hospital, Georg-August University Goettingen, D-37075 Goettingen, Germany; German Center for Cardiovascular Research (DZHK), Partner site Goettingen, D-37075 Goettingen, Germany.
Nicole EgerDepartment of Cardiology, Angiology and Pneumology, University Hospital Heidelberg, D-69120 Heidelberg, Germany.
Laura SchoppeDepartment of Cardiology, Angiology and Pneumology, University Hospital Heidelberg, D-69120 Heidelberg, Germany.
Rewati TappuDepartment of Cardiology, Angiology and Pneumology, University Hospital Heidelberg, D-69120 Heidelberg, Germany.
Karoline E KokotKlinik und Poliklinik für Kardiologie, Universitätskrankenhaus Leipzig, D-04103 Leipzig, Germany.
Jasmin M KneuerKlinik und Poliklinik für Kardiologie, Universitätskrankenhaus Leipzig, D-04103 Leipzig, Germany.
Susanne GaulKlinik und Poliklinik für Kardiologie, Universitätskrankenhaus Leipzig, D-04103 Leipzig, Germany.
Diana M BordaloDepartment of Cardiology, Angiology and Pneumology, University Hospital Heidelberg, D-69120 Heidelberg, Germany; German Center for Cardiovascular Research (DZHK), Partner site Heidelberg, D-69120 Heidelberg, Germany.
Alan LaiDepartment of Cardiology, Angiology and Pneumology, University Hospital Heidelberg, D-69120 Heidelberg, Germany; German Center for Cardiovascular Research (DZHK), Partner site Heidelberg, D-69120 Heidelberg, Germany.
Jan HaasDepartment of Cardiology, Angiology and Pneumology, University Hospital Heidelberg, D-69120 Heidelberg, Germany; German Center for Cardiovascular Research (DZHK), Partner site Heidelberg, D-69120 Heidelberg, Germany.
Mahsa GhanbariBerlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine in the Helmholtz Association, D-10115 Berlin, Germany; Institute of Biology, Humboldt Universität zu Berlin, D-10099 Berlin, Germany.
Philipp Drewe-BossBerlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine in the Helmholtz Association, D-10115 Berlin, Germany; Institute of Biology, Humboldt Universität zu Berlin, D-10099 Berlin, Germany.
Martin LissNeuromuscular and Cardiovascular Cell Biology, Max Delbrück Center for Molecular Medicine in the Helmholtz Association, D-13092 Berlin, Germany; German Center for Cardiovascular Research (DZHK), Partner site Berlin, D-10117 Berlin, Germany.
Hugo A KatusDepartment of Cardiology, Angiology and Pneumology, University Hospital Heidelberg, D-69120 Heidelberg, Germany; German Center for Cardiovascular Research (DZHK), Partner site Heidelberg, D-69120 Heidelberg, Germany.
Uwe OhlerBerlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine in the Helmholtz Association, D-10115 Berlin, Germany; Institute of Biology, Humboldt Universität zu Berlin, D-10099 Berlin, Germany.
Michael GotthardtNeuromuscular and Cardiovascular Cell Biology, Max Delbrück Center for Molecular Medicine in the Helmholtz Association, D-13092 Berlin, Germany; German Center for Cardiovascular Research (DZHK), Partner site Berlin, D-10117 Berlin, Germany.
Ulrich LaufsKlinik und Poliklinik für Kardiologie, Universitätskrankenhaus Leipzig, D-04103 Leipzig, Germany.
Katrin Streckfuss-BömekeDepartment of Cardiology and Pneumology, University Hospital, Georg-August University Goettingen, D-37075 Goettingen, Germany; German Center for Cardiovascular Research (DZHK), Partner site Goettingen, D-37075 Goettingen, Germany.
Benjamin MederDepartment of Cardiology, Angiology and Pneumology, University Hospital Heidelberg, D-69120 Heidelberg, Germany; German Center for Cardiovascular Research (DZHK), Partner site Heidelberg, D-69120 Heidelberg, Germany; Stanford Genome Technology Center, Department of Genetics, Stanford Medical School, Palo Alto, CA 94304, USA. Electronic address: Benjamin.Meder@med.uni-heidelberg.de.
Heidelberg University · DEMax Delbrück Center · DEGerman Centre for Cardiovascular Research · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alternative mRNA splicing is a fundamental process to increase the versatility of the genome. In humans, cardiac mRNA splicing is involved in the pathophysiology of heart failure. Mutations in the splicing factor RNA binding motif protein 20 (RBM20) cause severe forms of cardiomyopathy. To identify novel cardiomyopathy-associated splicing factors, RNA-seq and tissue-enrichment analyses were performed, which identified up-regulated expression of Sam68-Like mammalian protein 2 (SLM2) in the left ventricle of dilated cardiomyopathy (DCM) patients. In the human heart, SLM2 binds to important transcripts of sarcomere constituents, such as those encoding myosin light chain 2 (MYL2), troponin I3 (TNNI3), troponin T2 (TNNT2), tropomyosin 1/2 (TPM1/2), and titin (TTN). Mechanistically, SLM2 mediates intron retention, prevents exon exclusion, and thereby mediates alternative splicing of the mRNA regions encoding the variable proline-, glutamate-, valine-, and lysine-rich (PEVK) domain and another part of the I-band region of titin. In summary, SLM2 is a novel cardiac splicing regulator with essential functions for maintaining cardiomyocyte integrity by binding to and processing the mRNAs of essential cardiac constituents such as titin.

Indexed as

Cardiomyopathy, DilatedHeart FailureConnectinGlutamatesHumansLysineProlineRNA-Binding ProteinsRNA, MessengerRNA Splicing FactorsTropomyosinTroponin ITroponin TValineConnectinGlutamatesKHDRBS3 protein, humanLysineProlineRNA-Binding ProteinsRNA, MessengerRNA Splicing FactorsTropomyosinTroponin ITroponin TValineDilated cardiomyopathyKHDRBS3SLM2SplicingTitin

Identifiers

PMID34273561
PMCPMC9510876
OpenAlexW3178543783

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.