Evidence map›Paper›PMID 34272801›Full record

ArticlePlant biotechnology journal2021

Towards engineering ectomycorrhization into switchgrass bioenergy crops via a lectin receptor-like kinase.

Zhenzhen Qiao, Timothy B Yates, Him K Shrestha, Nancy L Engle, Amy Flanagan, Jennifer L Morrell-Falvey, Yali Sun, Timothy J Tschaplinski, Paul E Abraham, Jessy Labbé and 5 more

Open access · goldAbstract read
In one paragraph

Article in Plant biotechnology journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
  2. The ectomycorrhizal fungusFrontiers in microbiology · 2024
    Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
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  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Zhenzhen QiaoBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.ORCID 0000-0002-4102-5015
Timothy B YatesBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Him K ShresthaGenome Science and Technology, University of Tennessee, Knoxville, TN, USA.
Nancy L EngleBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Amy FlanaganNoble Research Institute, Ardmore, OK, USA.
Jennifer L Morrell-FalveyBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Yali SunBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.ORCID 0000-0003-0293-1661
Timothy J TschaplinskiBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Paul E AbrahamBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Jessy LabbéBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Zeng-Yu WangNoble Research Institute, Ardmore, OK, USA.
Robert L HettichBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Gerald A TuskanBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Wellington MucheroBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Jin-Gui ChenBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.ORCID 0000-0002-1752-4201
Oak Ridge National Laboratory · USNoble Research Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Soil-borne microbes can establish compatible relationships with host plants, providing a large variety of nutritive and protective compounds in exchange for photosynthesized sugars. However, the molecular mechanisms mediating the establishment of these beneficial relationships remain unclear. Our previous genetic mapping and whole-genome resequencing studies identified a gene deletion event of a Populus trichocarpa lectin receptor-like kinase gene PtLecRLK1 in Populus deltoides that was associated with poor-root colonization by the ectomycorrhizal fungus Laccaria bicolor. By introducing PtLecRLK1 into a perennial grass known to be a non-host of L. bicolor, switchgrass (Panicum virgatum L.), we found that L. bicolor colonizes ZmUbipro-PtLecRLK1 transgenic switchgrass roots, which illustrates that the introduction of PtLecRLK1 has the potential to convert a non-host to a host of L. bicolor. Furthermore, transcriptomic and proteomic analyses on inoculated-transgenic switchgrass roots revealed genes/proteins overrepresented in the compatible interaction and underrepresented in the pathogenic defence pathway, consistent with the view that pathogenic defence response is down-regulated during compatible interaction. Metabolomic profiling revealed that root colonization in the transgenic switchgrass was associated with an increase in N-containing metabolites and a decrease in organic acids, sugars, and aromatic hydroxycinnamate conjugates, which are often seen in the early steps of establishing compatible interactions. These studies illustrate that PtLecRLK1 is able to render a plant susceptible to colonization by the ectomycorrhizal fungus L. bicolor and shed light on engineering mycorrhizal symbiosis into a non-host to enhance plant productivity and fitness on marginal lands.

Indexed as

PanicumLectinsPlant ProteinsPlant RootsProteomicsLectinsPlant Proteinsectomycorrhizal symbiosisLaccaria bicolorPanicum virgatumPtLecRLK1switchgrass

Identifiers

PMID34272801
PMCPMC8633507
OpenAlexW3178934807

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.