Evidence map›Paper›PMID 34272504›Full record

ArticleHeredity2021

Pedigree-based and phylogenetic methods support surprising patterns of mutation rate and spectrum in the gray mouse lemur.

C Ryan Campbell, George P Tiley, Jelmer W Poelstra, Kelsie E Hunnicutt, Peter A Larsen, Hui-Jie Lee, Jeffrey L Thorne, Mario Dos Reis, Anne D Yoder

Abstract read
In one paragraph

Article in Heredity, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

  1. Article
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  3. Review
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  11. Article
  12. Article
  13. Inferring the demographic history of aye-ayes (bioRxiv : the preprint server for biology · 2024
    Article
  14. Characterizing the rates and patterns ofbioRxiv : the preprint server for biology · 2024
    Article
  15. Review
  16. Review
  17. Article
  18. De Novo Mutation Rates in Sticklebacks.Molecular biology and evolution · 2023
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

C Ryan Campbell *Department of Biology, Duke University, Durham, NC, USA.
George P Tiley *Department of Biology, Duke University, Durham, NC, USA.ORCID http://orcid.org/0000-0003-0053-0207
Jelmer W PoelstraDepartment of Biology, Duke University, Durham, NC, USA.
Kelsie E HunnicuttDepartment of Biology, Duke University, Durham, NC, USA.ORCID http://orcid.org/0000-0002-9674-0630
Peter A LarsenDepartment of Biology, Duke University, Durham, NC, USA.
Hui-Jie LeeDepartment of Biostatistics and Bioinformatics, Duke University, Durham, NC, USA.ORCID http://orcid.org/0000-0002-6060-8443
Jeffrey L ThorneBioinformatics Research Center, North Carolina State University, Raleigh, NC, USA.
Mario Dos ReisSchool of Biological and Chemical Sciences, Queen Mary University of London, London, UK.ORCID http://orcid.org/0000-0001-9514-3976
Anne D YoderDepartment of Biology, Duke University, Durham, NC, USA. anne.yoder@duke.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mutations are the raw material on which evolution acts, and knowledge of their frequency and genomic distribution is crucial for understanding how evolution operates at both long and short timescales. At present, the rate and spectrum of de novo mutations have been directly characterized in relatively few lineages. Our study provides the first direct mutation-rate estimate for a strepsirrhine (i.e., the lemurs and lorises), which comprises nearly half of the primate clade. Using high-coverage linked-read sequencing for a focal quartet of gray mouse lemurs (Microcebus murinus), we estimated the mutation rate to be among the highest calculated for a mammal at 1.52 × 10

Indexed as

CheirogaleidaeAnimalsGenomeMiceMutation RatePedigreePhylogeny

Identifiers

PMID34272504
PMCPMC8322134

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.