Evidence map›Paper›PMID 34272498›Full record

ArticleBritish journal of cancer2022

Correlation between targeted RNAseq signature of breast cancer CTCs and onset of bone-only metastases.

Domenica Lovero, Stella D'Oronzo, Raffaele Palmirotta, Paola Cafforio, Janet Brown, Steven Wood, Camillo Porta, Eleonora Lauricella, Robert Coleman, Franco Silvestris

Open access · bronzeAbstract read
In one paragraph

Article in British journal of cancer, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Domenica Lovero *Department of Biomedical Sciences and Human Oncology-Section of Internal Medicine and Clinical Oncology, University of Bari Aldo Moro, Bari, Italy.
Stella D'Oronzo *Department of Biomedical Sciences and Human Oncology-Section of Internal Medicine and Clinical Oncology, University of Bari Aldo Moro, Bari, Italy.
Raffaele PalmirottaDepartment of Biomedical Sciences and Human Oncology-Section of Internal Medicine and Clinical Oncology, University of Bari Aldo Moro, Bari, Italy.
Paola CafforioDepartment of Biomedical Sciences and Human Oncology-Section of Internal Medicine and Clinical Oncology, University of Bari Aldo Moro, Bari, Italy.
Janet BrownDepartment of Oncology and Metabolism, University of Sheffield, Weston Park Hospital, Sheffield, UK.
Steven WoodDepartment of Oncology and Metabolism, University of Sheffield, Weston Park Hospital, Sheffield, UK.
Camillo PortaDepartment of Biomedical Sciences and Human Oncology-Section of Internal Medicine and Clinical Oncology, University of Bari Aldo Moro, Bari, Italy.
Eleonora LauricellaDepartment of Biomedical Sciences and Human Oncology-Section of Internal Medicine and Clinical Oncology, University of Bari Aldo Moro, Bari, Italy.
Robert ColemanDepartment of Oncology and Metabolism, University of Sheffield, Weston Park Hospital, Sheffield, UK.
Franco SilvestrisDepartment of Biomedical Sciences and Human Oncology-Section of Internal Medicine and Clinical Oncology, University of Bari Aldo Moro, Bari, Italy. francosilvestris@gmail.com.ORCID http://orcid.org/0000-0002-5555-2617
University of Bari Aldo Moro · ITWeston Park Cancer Centre · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBone is the most frequent site of metastases from breast cancer (BC), but no biomarkers are yet available to predict skeletal dissemination.

methodsWe attempted to identify a gene signature correlated with bone metastasis (BM) onset in circulating tumour cells (CTCs), isolated by a DEPArray-based protocol from 40 metastatic BC patients and grouped according to metastasis sites, namely "BM" (bone-only), "ES" (extra-skeletal) or BM + ES (bone + extra-skeletal).

resultsA 134-gene panel was first validated through targeted RNA sequencing (RNAseq) on sub-clones of the MDA-MB-231 BC cell line with variable organotropism, which successfully shaped their clustering. The panel was then applied to CTC groups and, in particular, the "BM" vs "ES" CTC comparison revealed 31 differentially expressed genes, including MAF, CAPG, GIPC1 and IL1B, playing key prognostic roles in BC.

conclusionSuch evidence confirms that CTCs are suitable biological sources for organotropism investigation through targeted RNAseq and might deserve future applications in wide-scale prospective studies.

Indexed as

TranscriptomeAdultAgedBiomarkers, TumorBone NeoplasmsBreast NeoplasmsFemaleHumansMiddle AgedNeoplastic Cells, CirculatingProspective StudiesSequence Analysis, RNASurvival RateBiomarkers, Tumor

Identifiers

PMID34272498
PMCPMC8810805
OpenAlexW3179336956

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.