Evidence map›Paper›PMID 34271985›Full record

ArticleHereditas2021

Identification and characterization of miRNAs associated with sterile flower buds in the tea plant based on small RNA sequencing.

Hao Qu, Yue Liu, Huibing Jiang, Yufei Liu, Weixi Song, Linbo Chen

Open access · goldAbstract read
In one paragraph

Article in Hereditas, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
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  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Hao Qu *Tea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai, Xishuangbanna, 666201, China.
Yue Liu *Tea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai, Xishuangbanna, 666201, China.
Huibing JiangTea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai, Xishuangbanna, 666201, China.
Yufei LiuTea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai, Xishuangbanna, 666201, China.
Weixi SongTea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai, Xishuangbanna, 666201, China.
Linbo ChenTea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai, Xishuangbanna, 666201, China. ynnkycys@126.com.ORCID http://orcid.org/0000-0002-3451-5390
Yunnan Academy of Agricultural Sciences · CNXishuangbanna Tropical Botanical Garden · CN

Funding

National Natural Science Foundation of China 32060699
6 · The paper itself

Abstract

backgroundmiRNAs are a type of conserved, small RNA molecule that regulate gene expression and play an important role in the growth and development of plants. miRNAs are involved in seed germination, root development, shoot apical meristem maintenance, leaf development, and flower development by regulating various target genes. However, the role of miRNAs in the mechanism of tea plant flower sterility remains unclear. Therefore, we performed miRNA sequencing on the flowers of fertile male parents, female parents, and sterile offspring.

resultsA total of 55 known miRNAs and 90 unknown miRNAs were identified. In the infertile progeny, 37 miRNAs were differentially expressed; 18 were up-regulated and 19 were down-regulated. miR156, miR157, miR164, miR167, miR169, miR2111 and miR396 family members were down-regulated, and miR160, miR172 and miR319 family members were up-regulated. Moreover, we predicted that the 37 differentially expressed miRNAs target a total of 363 genes, which were enriched in 31 biological functions. We predicted that miR156 targets 142 genes, including ATD1A, SPL, ACA1, ACA2, CKB22 and MADS2.

conclusionWe detected a large number of differentially expressed miRNAs in the sterile tea plant flowers, and their target genes were involved in complex biological processes. Among these miRNAs, the down-regulation of miR156 may be one of the factor in the formation of sterile floral buds in tea plants.

Indexed as

Camellia sinensisFlowersGene Expression ProfilingGene Expression Regulation, PlantMicroRNAsPlant InfertilityRNA, PlantSequence Analysis, RNAMicroRNAsRNA, PlantCamellia sinensismiRNASterile floral budTarget genes

Identifiers

PMID34271985
PMCPMC8285856
OpenAlexW3156528643

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.