Evidence map›Paper›PMID 34270745›Full record

ArticleJournal of biochemistry2021

Dermatan sulphate is an activating ligand of anaplastic lymphoma kinase.

Masaaki Machino, Yuanhao Gong, Tomoya Ozaki, Yuji Suzuki, Eri Watanabe, Shiro Imagama, Kenji Kadomatsu, Kazuma Sakamoto

Erratum issuedAbstract read
PubMed Publisher
In one paragraph

Article in Journal of biochemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.1field-weighted citation impact, top 59% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Masaaki MachinoDepartment of Biochemistry, Nagoya University Graduate School of Medicine, Nagoya, Japan.ORCID 0000-0003-2570-4488
Yuanhao GongDepartment of Biochemistry, Nagoya University Graduate School of Medicine, Nagoya, Japan.
Tomoya OzakiDepartment of Biochemistry, Nagoya University Graduate School of Medicine, Nagoya, Japan.
Yuji SuzukiDepartment of Biochemistry, Nagoya University Graduate School of Medicine, Nagoya, Japan.
Eri WatanabeDepartment of Obesterics and Gynecology, Nagoya University Graduate School of Medicine, Nagoya, Japan.
Shiro ImagamaDepartment of Orthopedic Surgery, Nagoya University Graduate School of Medicine, Nagoya, Japan.ORCID 0000-0002-6951-8575
Kenji KadomatsuDepartment of Biochemistry, Nagoya University Graduate School of Medicine, Nagoya, Japan.ORCID 0000-0002-2548-2574
Kazuma SakamotoDepartment of Biochemistry, Nagoya University Graduate School of Medicine, Nagoya, Japan.
Nagoya University · JP

Funding

Japan Society for the Promotion of Science (JSPS) KAKENHI 16H05139
6 · The paper itself

Abstract

Anaplastic lymphoma kinase (ALK) is a receptor tyrosine kinase (RTK) that harbours a tyrosine kinase domain in its intracellular region and is expressed in both central and peripheral nervous systems. RTKs are activated upon ligand binding and receptor clustering; however, ALK remains an orphan receptor despite its pathological significance, especially in malignancy. Recent biochemical work showed that heparan sulphate (HS), an unbranched sulphated glycan, acts as a ligand for and activates ALK. Here, we show that dermatan sulphate (DS, chondroitin sulphate B) directly interacts with the extracellular N-terminal region of ALK as well as HS. The tetrasaccharide of DS was required and was sufficient for inducing autophosphorylation of ALK at tyrosine 1604, a marker for activated ALK. Interestingly, longer oligosaccharides caused enhanced activation of ALK, as was the case for HS. Our results provide a novel example of glycans as signalling molecules and shed light on the pathophysiological roles of ALK.

Indexed as

Anaplastic Lymphoma KinaseAnticoagulantsCell LineDermatan SulfateEnzyme ActivationHumansLigandsNeoplasmsPhosphorylationProtein BindingSignal TransductionALK protein, humanAnaplastic Lymphoma KinaseAnticoagulantsDermatan SulfateLigandsanaplastic lymphoma kinasedermatan sulphateligandphosphorylationreceptor tyrosine kinase

Identifiers

PMID34270745
OpenAlexW3181336906

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.