Evidence map›Paper›PMID 34269858›Full record

ArticleMicrobial ecology2022

How Communities of Marine Stramenopiles Varied with Environmental and Biological Variables in the Subtropical Northwestern Pacific Ocean.

Yun-Chi Lin, Chien-Pang Chin, Jinny Wu Yang, Kuo-Ping Chiang, Chih-Hao Hsieh, Gwo-Ching Gong, Chi-Yu Shih, Szu-Ying Chen

Open access · hybridAbstract read
In one paragraph

Article in Microbial ecology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
3.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Yun-Chi LinInstitute of Marine Environment and Ecology, National Taiwan Ocean University, Keelung, Taiwan.
Chien-Pang ChinFishery Research Institute, Keelung, Taiwan.
Jinny Wu YangEcology and Evolutionary Biology, University of Michigan, Ann Arbor, USA.
Kuo-Ping ChiangInstitute of Marine Environment and Ecology, National Taiwan Ocean University, Keelung, Taiwan. kpchiang@mail.ntou.edu.tw.ORCID http://orcid.org/0000-0002-2888-4528
Chih-Hao HsiehInstitute of Oceanography, National Taiwan University, Taipei, Taiwan.
Gwo-Ching GongInstitute of Marine Environment and Ecology, National Taiwan Ocean University, Keelung, Taiwan.
Chi-Yu ShihInstitute of Marine Biology, National Taiwan Ocean University, Keelung, Taiwan.
Szu-Ying ChenInstitute of Oceanography, National Taiwan University, Taipei, Taiwan.
National Taiwan Ocean University · TWNational Taiwan University · TW

Funding

Ministry of Science and Technology, Taiwan 104-2811-M-019- 003Ministry of Science and Technology, Taiwan 107-2611-M-019 -002 -MY3Ministry of Science and Technology, Taiwan 109-2611-M-019 -018
6 · The paper itself

Abstract

MArine STramenopiles (MASTs) have been recognized as parts of heterotrophic protists and contribute substantially to protist abundances in the ocean. However, little is known about their spatiotemporal variations with respect to environmental and biological factors. The objectives of this study are to use canonical correspondence analysis to investigate how MASTs communities are shaped by environmental variables, and co-occurrence networks to examine their potential interactions with prokaryotic communities. Our dataset came from the southern East China Sea (sECS) in the subtropical northwestern Pacific, and involved 14 cruises along a coastal-oceanic transect, each of which sampled surface water from 4 to 7 stations. MASTs communities were revealed by metabarcoding of 18S rDNA V4 region. Most notably, MAST-9 had a high representation in warm waters in terms of read number and diversity. Subclades of MAST-9C and -9D showed slightly different niches, with MAST-9D dominating in more coastal waters where concentrations of nitrite and Synechococcus were higher. MAST-1C was a common component of colder water during spring. Overall, canonical correspondence analysis showed that MASTs communities were significantly influenced by temperature, nitrite and Synechococcus concentrations. The co-occurrence networks showed that certain other minor prokaryotic taxa can influence MAST communities. This study provides insight into how MASTs communities varied with environmental and biological variables.

Indexed as

StramenopilesSynechococcusBiodiversityNitritesPacific OceanPhylogenySeawaterWaterNitritesWater18S rDNA V4 ampliconEcological distributionHeterotrophic protists

Identifiers

PMID34269858
PMCPMC9015972
OpenAlexW3179447089

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.