Evidence map›Paper›PMID 34267371›Full record

ArticleNature genetics2021

p53 convergently activates Dux/DUX4 in embryonic stem cells and in facioscapulohumeral muscular dystrophy cell models.

Edward J Grow, Bradley D Weaver, Christina M Smith, Jingtao Guo, Paula Stein, Sean C Shadle, Peter G Hendrickson, Nicholas E Johnson, Russell J Butterfield, Roberta Menafra and 4 more

Open access · greenAbstract read
In one paragraph

Article in Nature genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
6.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 111 citations in OpenAlex.

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  11. Zscan4 enables the formation of the Z compartment.Nature structural & molecular biology · 2026
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14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Edward J GrowHoward Hughes Medical Institute, Department of Oncological Sciences and Huntsman Cancer Institute, University of Utah School of Medicine, Salt Lake City, UT, USA.
Bradley D Weaver *Howard Hughes Medical Institute, Department of Oncological Sciences and Huntsman Cancer Institute, University of Utah School of Medicine, Salt Lake City, UT, USA.
Christina M Smith *Howard Hughes Medical Institute, Department of Oncological Sciences and Huntsman Cancer Institute, University of Utah School of Medicine, Salt Lake City, UT, USA.
Jingtao GuoHoward Hughes Medical Institute, Department of Oncological Sciences and Huntsman Cancer Institute, University of Utah School of Medicine, Salt Lake City, UT, USA.ORCID http://orcid.org/0000-0002-0159-5021
Paula SteinReproductive and Developmental Biology Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC, USA.ORCID http://orcid.org/0000-0002-2040-4593
Sean C ShadleHoward Hughes Medical Institute, Department of Oncological Sciences and Huntsman Cancer Institute, University of Utah School of Medicine, Salt Lake City, UT, USA.
Peter G HendricksonHoward Hughes Medical Institute, Department of Oncological Sciences and Huntsman Cancer Institute, University of Utah School of Medicine, Salt Lake City, UT, USA.ORCID http://orcid.org/0000-0002-3068-9350
Nicholas E JohnsonDepartment of Neurology, University of Utah School of Medicine, Salt Lake City, UT, USA.
Russell J ButterfieldDepartment of Neurology, University of Utah School of Medicine, Salt Lake City, UT, USA.
Roberta MenafraLeiden Genome Technology Center, Department of Human Genetics, Leiden University Medical Center, Leiden, the Netherlands.ORCID http://orcid.org/0000-0002-5266-0639
Susan L KloetLeiden Genome Technology Center, Department of Human Genetics, Leiden University Medical Center, Leiden, the Netherlands.ORCID http://orcid.org/0000-0001-9189-0640
Silvère M van der MaarelDepartment of Human Genetics, Leiden University Medical Center, Leiden, the Netherlands.
Carmen J WilliamsReproductive and Developmental Biology Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC, USA.ORCID http://orcid.org/0000-0001-6440-7086
Bradley R CairnsHoward Hughes Medical Institute, Department of Oncological Sciences and Huntsman Cancer Institute, University of Utah School of Medicine, Salt Lake City, UT, USA. bradley.cairns@hci.utah.edu.ORCID http://orcid.org/0000-0002-9864-8811
Howard Hughes Medical Institute · USLeiden University Medical Center · NLNational Institutes of Health · USUniversity of Utah · US

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Eric Collisson · 1985 to 2026
$296.4M
UTAH REGIONAL CANCER CENTERP30CA042014 · NCI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI KATHARINE S ULLMAN · 1986 to 2026
$72.6M
Utah Center for Clinical and Translational ScienceUL1TR002538 · NCATS · UNIVERSITY OF UTAH · PI HESS, RACHEL, MAJERSIK, JENNIFER JUHL · 2018 to 2022
$26.0M
Environmental influence on gametes and embryosZIAES102985 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI WILLIAMS, CARMEN · 2011 to 2025
$20.9M
Training Core [Parent Title: NOVEL THERAPEUTICS FOR FSHD]P50HD060848 · NICHD · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI EMERSON, CHARLES P. · 2018 to 2023
$8.6M
TRAINING PROGRAM IN GENETICST32GM007464 · NIGMS · UNIVERSITY OF UTAH · PI GRUNWALD, DAVID J., STANFIELD, GILLIAN · 1985 to 2020
$6.1M
Identifying Epigenetic, Chromatin, and Transcriptomic landscapes to Improve SCNT Development in an Animal ModelR01HD095833 · NICHD · UTAH STATE UNIVERSITY · PI CAIRNS, BRADLEY R., POLEJAEVA, IRINA A. · 2019 to 2023
$2.1M
Univ of Utah Cell Sorter for Flow Cytometry CoreS10RR026802 · NCRR · UNIVERSITY OF UTAH · PI GREEN, WAYNE FRANCIS · 2010 to 2010
$500k
Function of Kdm4dl-mediated heterochromatin removal in the preimplantation mouse embryoF32HD104442 · NICHD · UNIVERSITY OF UTAH · PI SHADLE, SEAN · 2021 to 2023
$205k
Investigating the role of DUX and miR-34a regulation in cell fate plasticity and cancerF30HD098000 · NICHD · UNIVERSITY OF UTAH · PI WEAVER, BRADLEY DON · 2018 to 2023
$205k
Improving Bovine Cloning Efficiency by Enhancing Reprogramming during Embryonic Genome Activation (EGA)F32HD094500 · NICHD · UNIVERSITY OF UTAH · PI GROW, EDWARD J · 2018 to 2020
$198k
Howard Hughes Medical InstituteIntramural NIH HHS ZIA ES102985NCATS NIH HHS UL1 TR002538NCI NIH HHS P30 CA015704NCI NIH HHS P30 CA042014NCRR NIH HHS S10 RR026802NICHD NIH HHS F30 HD098000NICHD NIH HHS F32 HD094500NICHD NIH HHS F32 HD104442NICHD NIH HHS P50 HD060848NICHD NIH HHS R01 HD095833NIGMS NIH HHS T32 GM007464
6 · The paper itself

Abstract

In mammalian embryos, proper zygotic genome activation (ZGA) underlies totipotent development. Double homeobox (DUX)-family factors participate in ZGA, and mouse Dux is required for forming cultured two-cell (2C)-like cells. Remarkably, in mouse embryonic stem cells, Dux is activated by the tumor suppressor p53, and Dux expression promotes differentiation into expanded-fate cell types. Long-read sequencing and assembly of the mouse Dux locus reveals its complex chromatin regulation including putative positive and negative feedback loops. We show that the p53-DUX/DUX4 regulatory axis is conserved in humans. Furthermore, we demonstrate that cells derived from patients with facioscapulohumeral muscular dystrophy (FSHD) activate human DUX4 during p53 signaling via a p53-binding site in a primate-specific subtelomeric long terminal repeat (LTR)10C element. In summary, our work shows that p53 activation convergently evolved to couple p53 to Dux/DUX4 activation in embryonic stem cells, embryos and cells from patients with FSHD, potentially uniting the developmental and disease regulation of DUX-family factors and identifying evidence-based therapeutic opportunities for FSHD.

Indexed as

AnimalsCell DifferentiationCellular ReprogrammingDNA DamageGene Expression Regulation, DevelopmentalHomeodomain ProteinsHumansMiceMice, KnockoutMouse Embryonic Stem CellsMuscular Dystrophy, FacioscapulohumeralNuclear ProteinsPluripotent Stem CellsTranscription FactorsTumor Suppressor Protein p53ZygoteDppa2 protein, mouseDppa4 protein, mouseDUX4L1 protein, humanDux4 protein, mouseHomeodomain ProteinsNuclear ProteinsTP53 protein, humanTranscription FactorsTrp53 protein, mouseTumor Suppressor Protein p53

Identifiers

PMID34267371
PMCPMC8513633
OpenAlexW3179237162

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.