Evidence map›Paper›PMID 34266958›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

POU4F3 pioneer activity enables ATOH1 to drive diverse mechanoreceptor differentiation through a feed-forward epigenetic mechanism.

Haoze V Yu, Litao Tao, Juan Llamas, Xizi Wang, John D Nguyen, Talon Trecek, Neil Segil

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
6.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 75 citations in OpenAlex.

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  5. eLife · 2025
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  6. bioRxiv : the preprint server for biology · 2025
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  17. Long-rangeProceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Haoze V YuDepartment of Stem Cell Biology and Regenerative Medicine, Eli and Edythe Broad Center for Regenerative Medicine and Stem Cell Biology at University of Southern California, Keck School of Medicine of the University of Southern California, Los Angeles, CA 90033.ORCID 0000-0002-3831-2291
Litao TaoDepartment of Stem Cell Biology and Regenerative Medicine, Eli and Edythe Broad Center for Regenerative Medicine and Stem Cell Biology at University of Southern California, Keck School of Medicine of the University of Southern California, Los Angeles, CA 90033.ORCID 0000-0002-9801-6515
Juan LlamasDepartment of Stem Cell Biology and Regenerative Medicine, Eli and Edythe Broad Center for Regenerative Medicine and Stem Cell Biology at University of Southern California, Keck School of Medicine of the University of Southern California, Los Angeles, CA 90033.
Xizi WangDepartment of Stem Cell Biology and Regenerative Medicine, Eli and Edythe Broad Center for Regenerative Medicine and Stem Cell Biology at University of Southern California, Keck School of Medicine of the University of Southern California, Los Angeles, CA 90033.ORCID 0000-0002-2384-7218
John D NguyenDepartment of Stem Cell Biology and Regenerative Medicine, Eli and Edythe Broad Center for Regenerative Medicine and Stem Cell Biology at University of Southern California, Keck School of Medicine of the University of Southern California, Los Angeles, CA 90033.
Talon TrecekDepartment of Stem Cell Biology and Regenerative Medicine, Eli and Edythe Broad Center for Regenerative Medicine and Stem Cell Biology at University of Southern California, Keck School of Medicine of the University of Southern California, Los Angeles, CA 90033.
Neil SegilDepartment of Stem Cell Biology and Regenerative Medicine, Eli and Edythe Broad Center for Regenerative Medicine and Stem Cell Biology at University of Southern California, Keck School of Medicine of the University of Southern California, Los Angeles, CA 90033; nsegil@med.usc.edu.ORCID 0000-0002-0441-2067
University of Southern California · US

Funding

Training in Hearing & Communication NeuroscienceT32DC009975 · NIDCD · UNIVERSITY OF SOUTHERN CALIFORNIA · PI Christopher A Shera · 2009 to 2026
$5.0M
Lineage reprogramming for hearing loss: development of drug screening and gene therapy approachesR01DC015530 · NIDCD · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ICHIDA, JUSTIN KAWIKA, MCMAHON, ANDREW P. · 2016 to 2020
$3.0M
Epigenetic mechanisms underlying the failure of hair cell regeneration in mammalsR01DC015829 · NIDCD · UNIVERSITY OF SOUTHERN CALIFORNIA · PI MCMAHON, ANDREW P., OGHALAI, JOHN S · 2018 to 2022
$2.8M
Training in Developmental Biology, Stem Cells and RegenerationT32HD060549 · NICHD · UNIVERSITY OF SOUTHERN CALIFORNIA · PI Gage D Crump · 2011 to 2026
$2.5M
Epigenetic mechanisms triggering differentiation and plasticity in the developing organ of CortiF31DC017376 · NIDCD · UNIVERSITY OF SOUTHERN CALIFORNIA · PI TRECEK, TALON ANTHONY · 2019 to 2021
$129k
Heterochromatin as a barrier to regeneration in the mouse cochleaF31DC018703 · NIDCD · UNIVERSITY OF SOUTHERN CALIFORNIA · PI NGUYEN, JOHN DUC · 2020 to 2023
$128k
NICHD NIH HHS T32 HD060549NIDCD NIH HHS F31 DC017376NIDCD NIH HHS F31 DC018703NIDCD NIH HHS R01 DC015530NIDCD NIH HHS R01 DC015829NIDCD NIH HHS T32 DC009975
6 · The paper itself

Abstract

During embryonic development, hierarchical cascades of transcription factors interact with lineage-specific chromatin structures to control the sequential steps in the differentiation of specialized cell types. While examples of transcription factor cascades have been well documented, the mechanisms underlying developmental changes in accessibility of cell type-specific enhancers remain poorly understood. Here, we show that the transcriptional "master regulator" ATOH1-which is necessary for the differentiation of two distinct mechanoreceptor cell types, hair cells in the inner ear and Merkel cells of the epidermis-is unable to access much of its target enhancer network in the progenitor populations of either cell type when it first appears, imposing a block to further differentiation. This block is overcome by a feed-forward mechanism in which ATOH1 first stimulates expression of POU4F3, which subsequently acts as a pioneer factor to provide access to closed ATOH1 enhancers, allowing hair cell and Merkel cell differentiation to proceed. Our analysis also indicates the presence of both shared and divergent ATOH1/POU4F3-dependent enhancer networks in hair cells and Merkel cells. These cells share a deep developmental lineage relationship, deriving from their common epidermal origin, and suggesting that this feed-forward mechanism preceded the evolutionary divergence of these very different mechanoreceptive cell types.

Indexed as

AnimalsBasic Helix-Loop-Helix ProteinsCell DifferentiationCochleaEnhancer Elements, GeneticEpigenesis, GeneticHair Cells, AuditoryHomeodomain ProteinsHumansMechanoreceptorsMerkel CellsMiceTranscription Factor Brn-3CAtoh1 protein, mouseBasic Helix-Loop-Helix ProteinsHomeodomain ProteinsPou4f3 protein, mouseTranscription Factor Brn-3CATOH1 and POU4F3feed-forward epigenetic transcriptional controlinner ear hair cellsmechanoreceptor evolutionMerkel cells

Identifiers

PMID34266958
PMCPMC8307294
OpenAlexW3179308292

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.