Evidence map›Paper›PMID 34264747›Full record

ArticleJCO clinical cancer informatics2021

Machine Learning Radiomics Model for Early Identification of Small-Cell Lung Cancer on Computed Tomography Scans.

Rajesh P Shah, Heather M Selby, Pritam Mukherjee, Shefali Verma, Peiyi Xie, Qinmei Xu, Millie Das, Sachin Malik, Olivier Gevaert, Sandy Napel

Abstract read
In one paragraph

Article in JCO clinical cancer informatics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
  2. Article
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  4. Review
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  8. Article
  9. Artificial intelligence in oncologic imaging.European journal of radiology open · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Rajesh P ShahVeterans Affairs Palo Alto Health Care System, Palo Alto, CA.ORCID 0000-0003-4916-1377
Heather M SelbyVeterans Affairs Palo Alto Health Care System, Palo Alto, CA.
Pritam MukherjeeDepartment of Medicine, Center for Biomedical Informatics Research (BMIR), Stanford University, Stanford, CA.
Shefali VermaPalo Alto Veterans Institute for Research, Palo Alto, CA.
Peiyi XieDepartment of Medicine, Center for Biomedical Informatics Research (BMIR), Stanford University, Stanford, CA.
Qinmei XuDepartment of Medicine, Center for Biomedical Informatics Research (BMIR), Stanford University, Stanford, CA.ORCID 0000-0001-7200-0817
Millie DasVeterans Affairs Palo Alto Health Care System, Palo Alto, CA.
Sachin MalikVeterans Affairs Palo Alto Health Care System, Palo Alto, CA.
Olivier GevaertDepartment of Medicine, Center for Biomedical Informatics Research (BMIR), Stanford University, Stanford, CA.ORCID 0000-0002-9965-5466
Sandy NapelDepartment of Radiology, Stanford University, Stanford, CA.ORCID 0000-0002-6876-5507

Funding

Informatics Tools for Optimized Imaging Biomarkers for Cancer Research&DiscoveryU24CA180927 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI KALPATHY-CRAMER, JAYASHREE, ROSEN, BRUCE R · 2014 to 2018
$3.4M
Multi-scale modeling of glioma for the prediction of treatment response, treatment monitoring and treatment allocationR01CA260271 · NCI · STANFORD UNIVERSITY · PI GEVAERT, OLIVIER · 2021 to 2025
$3.1M
NCI NIH HHS R01 CA260271NCI NIH HHS U24 CA180927
6 · The paper itself

Abstract

purposeSmall-cell lung cancer (SCLC) is the deadliest form of lung cancer, partly because of its short doubling time. Delays in imaging identification and diagnosis of nodules create a risk for stage migration. The purpose of our study was to determine if a machine learning radiomics model can detect SCLC on computed tomography (CT) among all nodules at least 1 cm in size. MATERIALS AND

methodsComputed tomography scans from a single institution were selected and resampled to 1 × 1 × 1 mm. Studies were divided into SCLC and other scans comprising benign, adenocarcinoma, and squamous cell carcinoma that were segregated into group A (noncontrast scans) and group B (contrast-enhanced scans). Four machine learning classification models, support vector classifier, random forest (RF), XGBoost, and logistic regression, were used to generate radiomic models using 59 quantitative first-order and texture Imaging Biomarker Standardization Initiative compliant PyRadiomics features, which were found to be robust between two segmenters with minimum Redundancy Maximum Relevance feature selection within each leave-one-out-cross-validation to avoid overfitting. The performance was evaluated using a receiver operating characteristic curve. A final model was created using the RF classifier and aggregate minimum Redundancy Maximum Relevance to determine feature importance.

resultsA total of 103 studies were included in the analysis. The area under the receiver operating characteristic curve for RF, support vector classifier, XGBoost, and logistic regression was 0.81, 0.77, 0.84, and 0.84 in group A, and 0.88, 0.87, 0.85, and 0.81 in group B, respectively. Nine radiomic features in group A and 14 radiomic features in group B were predictive of SCLC. Six radiomic features overlapped between groups A and B.

conclusionA machine learning radiomics model may help differentiate SCLC from other lung lesions.

Indexed as

Lung NeoplasmsTomography, X-Ray ComputedHumansMachine LearningRetrospective StudiesROC Curve

Identifiers

PMID34264747
PMCPMC8812622

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.