Evidence map›Paper›PMID 34262404›Full record

ArticleReproductive medicine and biology2021

Isolation and characterization of fetal nucleated red blood cells from maternal blood as a target for single cell sequencing-based non-invasive genetic testing.

Noriko Ito, Kazuhiro Tsukamoto, Kosuke Taniguchi, Ken Takahashi, Aikou Okamoto, Hiroaki Aoki, Yuka Otera-Takahashi, Michihiro Kitagawa, Hiroko Ogata-Kawata, Hideaki Morita and 2 more

Abstract read
In one paragraph

Article in Reproductive medicine and biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
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  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Noriko ItoDepartment of Maternal-Fetal Biology National Center for Child Health and Development Tokyo Japan.
Kazuhiro TsukamotoDepartment of Pharmacotherapeutics, Course of Medical and Dental Sciences Nagasaki University Graduate School of Biomedical Sciences Nagasaki Japan.
Kosuke TaniguchiDepartment of Maternal-Fetal Biology National Center for Child Health and Development Tokyo Japan.
Ken TakahashiDepartment of Maternal-Fetal Biology National Center for Child Health and Development Tokyo Japan.
Aikou OkamotoDepartment of Obstetrics and Gynecology The Jikei University School of Medicine Tokyo Japan.
Hiroaki AokiAoki Obstetrics and Gynecology Clinic Tokyo Japan.
Yuka Otera-TakahashiSanno Birth Center Tokyo Japan.
Michihiro KitagawaSanno Birth Center Tokyo Japan.
Hiroko Ogata-KawataDepartment of Maternal-Fetal Biology National Center for Child Health and Development Tokyo Japan.
Hideaki MoritaDepartment of Allergy and Clinical Immunology National Center for Child Health and Development Tokyo Japan.
Kenichiro HataDepartment of Maternal-Fetal Biology National Center for Child Health and Development Tokyo Japan.
Kazuhiko NakabayashiDepartment of Maternal-Fetal Biology National Center for Child Health and Development Tokyo Japan.ORCID https://orcid.org/0000-0003-2927-0963

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeAlthough non-invasive prenatal testing (NIPT) based on cell-free DNA (cfDNA) in maternal plasma has been prevailing worldwide, low levels of fetal DNA fraction may lead to false-negative results. Since fetal cells in maternal blood provide a pure source of fetal genomic DNA, we aimed to establish a workflow to isolate and sequence fetal nucleated red blood cells (fNRBCs) individually as a target for NIPT.

methodsUsing male-bearing pregnancy cases, we isolated fNRBCs individually from maternal blood by FACS, and obtained their genomic sequence data through PCR screening with a Y-chromosome marker and whole-genome amplification (WGA)-based whole-genome sequencing.

resultsThe PCR and WGA efficiencies of fNRBC candidates were consistently lower than those of control cells. Sequencing data analyses revealed that although the majority of the fNRBC candidates were confirmed to be of fetal origin, many of the WGA-based genomic libraries from fNRBCs were considered to have been amplified from a portion of genomic DNA.

conclusionsWe established a workflow to isolate and sequence fNRBCs individually. However, our results demonstrated that, to make cell-based NIPT targeting fNRBCs feasible, cell isolation procedures need to be further refined such that the nuclei of fNRBCs are kept intact.

Indexed as

fetal nucleated red blood cell (fNRBC)fluorescence‐activated cell sorting (FACS)non‐invasive prenatal testing (NIPT)single cellwhole genome amplification (WGA)

Identifiers

PMID34262404
PMCPMC8254165

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.