Evidence map›Paper›PMID 34262235›Full record

ArticleProceedings of SPIE--the International Society for Optical Engineering2018

An application of transfer learning to neutrophil cluster detection for tuberculosis: Efficient implementation with nonmetric multidimensional scaling and sampling.

M Khalid Khan Niazi, Gillian Beamer, Metin N Gurcan

Open access · greenAbstract read
In one paragraph

Article in Proceedings of SPIE--the International Society for Optical Engineering, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

M Khalid Khan NiaziDepartment of Biomedical Informatics, The Ohio State University, Columbus, Ohio.
Gillian BeamerDepartment of Infectious Disease and Global Health, Cummings School of Veterinary Medicine, Tufts University, Grafton, MA.
Metin N GurcanCenter for Biomedical Informatics, Wake Forest School of Medicine, Winston-Salem, NC.
The Ohio State University · USWake Forest University · US

Funding

Translational Therapeutics Research Program (TT)P30CA016058 · NCI · OHIO STATE UNIVERSITY · PI Jennifer A. Woyach · 1985 to 2026
$132.3M
Predicting tuberculosis outcomes using genotypic and biomarker signaturesR01HL145411 · NHLBI · TUFTS UNIVERSITY BOSTON · PI BEAMER, GILLIAN L · 2019 to 2023
$3.4M
Pathology Image Informatics Platform for visualization, analysis and managementU24CA199374 · NCI · CASE WESTERN RESERVE UNIVERSITY · PI GURCAN, METIN NAFI, MADABHUSHI, ANANT · 2015 to 2019
$2.9M
Computer-based assessment of tumor microenvironment (TME) in Follicular LymphomaR01CA134451 · NCI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI GURCAN, METIN NAFI, LOZANSKI, GERARD · 2009 to 2017
$2.3M
Task-Specific Compression for Biomedical Big DataU01CA198945 · NCI · UNIVERSITY OF ARIZONA · PI BILGIN, ALI · 2015 to 2017
$1.6M
Mesenchynmal stem cells as a protective niche for latent M. tuberculosisR56AI111823 · NIAID · ADA FORSYTH INSTITUTE, INC. · PI BEAMER, GILLIAN L, CAMPOS-NETO, ANTONIO · 2014 to 2014
$619k
Genetic-based susceptibility to pulmonary tuberculosisR21AI115038 · NIAID · TUFTS UNIVERSITY BOSTON · PI BEAMER, GILLIAN L · 2015 to 2016
$481k
NCI NIH HHS P30 CA016058NCI NIH HHS R01 CA134451NCI NIH HHS U01 CA198945NCI NIH HHS U24 CA199374NHLBI NIH HHS R01 HL145411NIAID NIH HHS R21 AI115038NIAID NIH HHS R56 AI111823
6 · The paper itself

Abstract

A neutrophil is a type of white blood cell that is responsible for killing pathogenic bacteria but may simultaneously damage host tissue. We established a method to automatically detect neutrophils from slides stained with hematoxylin and eosin (H&E), because there is growing evidence that neutrophils, which respond to

Indexed as

H&Einceptionneutrophilsnonmetric multidimensional scalingtransfer learningTuberculosis

Identifiers

PMID34262235
PMCPMC8276895
OpenAlexW3178585387

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.