Evidence map›Paper›PMID 34259934›Full record

ArticleMedical oncology (Northwood, London, England)2021

Computational study on novel natural inhibitors targeting BCL2.

Xiaye Lv, Yuting Jiang, Xinhui Wang, HaoQun Xie, Gaojing Dou, Jing Wang, Wenzhuo Yang, Hongyu Wang, Zijian Li, Xiangheng Zhang and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Medical oncology (Northwood, London, England), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Xiaye LvDepartment of Neurosurgery, Sun Yat-Sen University Cancer Center, Guangzhou, 510060, China.
Yuting JiangClinical College, Jilin University, Street Xinmin 70, Changchun, China.
Xinhui WangDepartment of Oncology, First People's Hospital of Xinxiang, Street Yiheng 63, Xinxiang, China.
HaoQun XieClinical College, Jilin University, Street Xinmin 70, Changchun, China.
Gaojing DouDepartment of Breast Surgery, The First Hospital of Jilin University, Street Xinmin 71, Changchun, China.
Jing WangClinical College, Jilin University, Street Xinmin 70, Changchun, China.
Wenzhuo YangClinical College, Jilin University, Street Xinmin 70, Changchun, China.
Hongyu WangClinical College, Jilin University, Street Xinmin 70, Changchun, China.
Zijian LiDepartment of Neurosurgery, Sun Yat-Sen University Cancer Center, Guangzhou, 510060, China.ORCID http://orcid.org/0000-0002-6161-9224
Xiangheng ZhangDepartment of Neurosurgery, Sun Yat-Sen University Cancer Center, Guangzhou, 510060, China. zhangxh@sysucc.org.cn.
Zhenghe ChenDepartment of Neurosurgery, Sun Yat-Sen University Cancer Center, Guangzhou, 510060, China. chenzhengh@sysucc.org.cn.
Jilin University · CNSun Yat-sen University · CNFirst Affiliated Hospital of Xinxiang Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ideal lead compounds and candidate drugs with inhibitory effect on BCL2 were screened from ZINC database, which laid a foundation for drug development and compound improvement of drug treatment for diffuse large B-cell lymphoma (DLCBL). Identification of potential BCL2 inhibitors by computer-aided virtual screening. Libdock was applied to 17,931 compounds and the top 20 were selected for further analysis. Selected compounds were performed absorption, distribution, metabolism, and excretion (ADME) and toxicity prediction. The binding affinity between the selected ligands and BCL2 was confirmed by Molecular docking. The new natural compounds, ZINC00000255131 and ZINC00013298233, were found to bind closely with BCL2. Furthermore, they all scored lower in ames-induced mutagenicity, rodent carcinogenicity, non-developmental toxicity potential, and cytochrome P4502D6 tolerance. Molecular dynamics simulation shows that the combinations of ZINC00000255131 and ZINC00013298233 with BCL2 in the natural environment are more stable. Two new compounds, ZINC00000255131 and ZINC00013298233, were found to be potential inhibitors of BCL2. These compounds have been proved to be safe, which is of great significance for the development and improvement of DLCBL drugs.

Indexed as

Computer SimulationAntineoplastic AgentsBiological ProductsDrug Delivery SystemsDrug Evaluation, PreclinicalHumansLymphoma, Large B-Cell, DiffuseMolecular Docking SimulationMolecular Dynamics SimulationProtein Structure, SecondaryProtein Structure, TertiaryProto-Oncogene Proteins c-bcl-2Antineoplastic AgentsBCL2 protein, humanBiological ProductsProto-Oncogene Proteins c-bcl-2BCL2Drug treatmentInhibitorVirtual screening

Identifiers

PMID34259934
PMCPMC8280014
OpenAlexW3131216567

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.