Evidence map›Paper›PMID 34259630›Full record

ArticleeLife2021

AAV ablates neurogenesis in the adult murine hippocampus.

Stephen Johnston, Sarah L Parylak, Stacy Kim, Nolan Mac, Christina Lim, Iryna Gallina, Cooper Bloyd, Alexander Newberry, Christian D Saavedra, Ondrej Novak and 3 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
8.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 86 citations in OpenAlex.

  1. Article
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  4. Article
  5. Allele-specific depletion ofMolecular therapy. Oncology · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. AAV vector development, back to the future.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Review
  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. AAV vector-derived elements integrate into Cas9-generated double-strand breaks and disrupt gene transcription.Molecular therapy : the journal of the American Society of Gene Therapy · 2024
    Article
  16. PTEN DELETION IN THE ADULT DENTATE GYRUS INDUCES EPILEPSY.bioRxiv : the preprint server for biology · 2024
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Stephen Johnston *Neurosciences Graduate Program, University of California, San Diego, La Jolla, United States.
Sarah L Parylak *Laboratory of Genetics, Salk Institute for Biological Studies, La Jolla, United States.
Stacy Kim *Laboratory of Genetics, Salk Institute for Biological Studies, La Jolla, United States.
Nolan MacDepartment of Biology, University of California, San Diego, La Jolla, United States.
Christina LimLaboratory of Genetics, Salk Institute for Biological Studies, La Jolla, United States.
Iryna GallinaLaboratory of Genetics, Salk Institute for Biological Studies, La Jolla, United States.
Cooper BloydLaboratory of Genetics, Salk Institute for Biological Studies, La Jolla, United States.
Alexander NewberryDepartment of Physics, University of California, San Diego, La Jolla, United States.
Christian D SaavedraLaboratory of Genetics, Salk Institute for Biological Studies, La Jolla, United States.
Ondrej NovakLaboratory of Experimental Epileptology, Department of Physiology, Second Faculty of Medicine, Charles University, Prague, United Kingdom.
J Tiago GonçalvesRuth L. and David S. Gottesman Institute for Stem Cell Biology and Regenerative Medicine, Albert Einstein College of Medicine, Bronx, United States.
Fred H GageLaboratory of Genetics, Salk Institute for Biological Studies, La Jolla, United States.ORCID 0000-0002-0938-4106
Matthew ShtrahmanDepartment of Neurosciences, University of California, San Diego, La Jolla, United States.ORCID 0000-0003-3185-890X
Salk Institute for Biological Studies · USUniversity of California San Diego · USAlbert Einstein College of Medicine · US

Funding

Viral Vector Core (VVC)P30CA014195 · NCI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI Ye Zheng · 1985 to 2026
$82.8M
Neurosciences Graduate Training ProgramT32NS061847 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Brenda L Bloodgood · 2008 to 2026
$7.7M
SUPPORT FOR THE ROSE F KENNEDY IDDRC P50P50HD105352 · NICHD · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI Julie Secombe · 2021 to 2026
$7.0M
Dynamics of activity-induced transcription in single dentate granule cellsR01MH114030 · NIMH · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI FRED H GAGE · 2017 to 2026
$3.8M
Assessing cellular aging in old and rejuvenated neurons from Alzheimer patientsR01AG056306 · NIA · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI GAGE, FRED H · 2017 to 2021
$2.4M
The Role of Adult-born Dentate Granule Cells in EpileptogenesisK08NS093130 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SHTRAHMAN, MATTHEW · 2016 to 2020
$1.0M
Incucyte Zoom Live Cell Analysis SystemS10OD025060 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI WILLERT, KARL H · 2018 to 2018
$173k
NCI NIH HHS P30 CA014195NIA NIH HHS R01 AG056306NICHD NIH HHS P50 HD105352NIH HHS S10 OD025060NIMH NIH HHS R01 MH114030NINDS NIH HHS K08 NS093130NINDS NIH HHS T32 NS061847
6 · The paper itself

Abstract

Recombinant adeno-associated virus (rAAV) has been widely used as a viral vector across mammalian biology and has been shown to be safe and effective in human gene therapy. We demonstrate that neural progenitor cells (NPCs) and immature dentate granule cells (DGCs) within the adult murine hippocampus are particularly sensitive to rAAV-induced cell death. Cell loss is dose dependent and nearly complete at experimentally relevant viral titers. rAAV-induced cell death is rapid and persistent, with loss of BrdU-labeled cells within 18 hr post-injection and no evidence of recovery of adult neurogenesis at 3 months post-injection. The remaining mature DGCs appear hyperactive 4 weeks post-injection based on immediate early gene expression, consistent with previous studies investigating the effects of attenuating adult neurogenesis. In vitro application of AAV or electroporation of AAV2 inverted terminal repeats (ITRs) is sufficient to induce cell death. Efficient transduction of the dentategyrus (DG)- without ablating adult neurogenesis- can be achieved by injection of rAAV2-retro serotyped virus into CA3. rAAV2-retro results in efficient retrograde labeling of mature DGCs and permits in vivo two-photon calcium imaging of dentate activity while leaving adult neurogenesis intact. These findings expand on recent reports implicating rAAV-linked toxicity in stem cells and other cell types and suggest that future work using rAAV as an experimental tool in the DG and as a gene therapy for diseases of the central nervous system should be carefully evaluated.

Indexed as

AdultAnimalsCell DeathCell ProliferationCentral Nervous SystemDependovirusGenetic TherapyGenetic VectorsHippocampusHumansInflammationMaleMiceMice, Inbred C57BLNeural Stem CellsNeurogenesisadeno-associated virus (AAV)adult neurogenesisdentate gyrusgene therapyhippocampusmouseneural progenitor cellneuroscienceregenerative medicinestem cells

Identifiers

PMID34259630
PMCPMC8331179
OpenAlexW3178205853

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.