Evidence map›Paper›PMID 34259623›Full record

ArticleeLife2021

Fast deep neural correspondence for tracking and identifying neurons in

Xinwei Yu, Matthew S Creamer, Francesco Randi, Anuj K Sharma, Scott W Linderman, Andrew M Leifer

Open access · goldAbstract read
In one paragraph

Article in eLife, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
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  10. Deep Learning-Based Cell Tracking in Deforming Organs and Moving Animals.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
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  14. TWISP: A Transgenic Worm for Interrogating Signal Propagation inbioRxiv : the preprint server for biology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Xinwei YuDepartment of Physics, Princeton University, Princeton, United States.ORCID 0000-0002-8699-3546
Matthew S CreamerPrinceton Neuroscience Institute, Princeton University, Princeton, United States.ORCID 0000-0002-9458-0629
Francesco RandiDepartment of Physics, Princeton University, Princeton, United States.ORCID 0000-0002-6200-7254
Anuj K SharmaDepartment of Physics, Princeton University, Princeton, United States.ORCID 0000-0001-5061-9731
Scott W LindermanDepartment of Statistics, Stanford University, Stanford, United States.ORCID 0000-0002-3878-9073
Andrew M LeiferDepartment of Physics, Princeton University, Princeton, United States.ORCID 0000-0002-5362-5093
Princeton University · USNeurosciences Institute · US

Funding

Stanford Vision Research CoreP30EY026877 · NEI · STANFORD UNIVERSITY · PI Jeffrey L Goldberg · 2017 to 2026
$8.0M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Neural representation of mating partners by male C. elegansR01NS113119 · NINDS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI LINDERMAN, SCOTT WARREN, SAMUEL, ARAVINTHAN D. · 2019 to 2023
$3.3M
Multicolor labeling for cell identification in the C. Elegans Nervous systemR21NS101629 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI MURRAY, JOHN ISAAC · 2017 to 2018
$459k
NEI NIH HHS P30 EY026877NIH HHS P40 OD010440NINDS NIH HHS R01 NS113119NINDS NIH HHS R21 NS101629
6 · The paper itself

Abstract

We present an automated method to track and identify neurons in

Indexed as

Deep LearningAlgorithmsAnimalsBrainCaenorhabditis elegansHandHumansMachine LearningNeural Networks, ComputerNeuronsartificial neural networkC. eleganscomputer visiondeep learningneurosciencephysics of living systemsregistrationtrackingtransformer

Identifiers

PMID34259623
PMCPMC8367385
OpenAlexW3121444399

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.