Evidence map›Paper›PMID 34255851›Full record

ArticlePlant & cell physiology2021

Characterization of a Cytosolic Acyl-Activating Enzyme Catalyzing the Formation of 4-Methylvaleryl-CoA for Pogostone Biosynthesis in Pogostemon Cablin.

Jing Chen, Lang Liu, Ying Wang, Zhengguo Li, Guodong Wang, George A Kraus, Eran Pichersky, Haiyang Xu

Open access · bronzeAbstract read
In one paragraph

Article in Plant & cell physiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Jing ChenSchool of Life Sciences, Chongqing University, Chongqing 401331, China.
Lang LiuSchool of Life Sciences, Chongqing University, Chongqing 401331, China.
Ying WangSchool of Life Sciences, Chongqing University, Chongqing 401331, China.
Zhengguo LiSchool of Life Sciences, Chongqing University, Chongqing 401331, China.ORCID 0000-0001-7019-2560
Guodong WangState Key Laboratory of Plant Genomics and National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.ORCID 0000-0001-9917-0656
George A KrausDepartment of Chemistry, Iowa State University, Ames, IA 50011, USA.
Eran PicherskyDepartment of Molecular, Cellular, and Developmental Biology, University of Michigan, Ann Arbor, MI 48109, USA.ORCID 0000-0002-4343-1535
Haiyang XuSchool of Life Sciences, Chongqing University, Chongqing 401331, China.ORCID 0000-0002-6954-0000
Chongqing University · CNChinese Academy of Sciences · CNIowa State University · USUniversity of Michigan · US

Funding

100 Talent Program 0304001104433Fundamental Research Funds for the Central Universities 2020CDJQY-A077National Natural Sciences Foundation of China 31970319The National Key Research and Development Program 2018YFD1000800
6 · The paper itself

Abstract

Pogostone, a compound with various pharmaceutical activities, is a major constituent of the essential oil preparation called Pogostemonis Herba, which is obtained from the plant Pogostemon cablin. The biosynthesis of pogostone has not been elucidated, but 4-methylvaleryl-CoA (4MVCoA) is a likely precursor. We analyzed the distribution of pogostone in P. cablin using gas chromatography-mass spectrometry (GC-MS) and found that pogostone accumulates at high levels in the main stems and leaves of young plants. A search for the acyl-activating enzyme (AAE) that catalyzes the formation of 4MVCoA from 4-methylvaleric acid was launched, using an RNAseq-based approach to identify 31 unigenes encoding putative AAEs including the PcAAE2, the transcript profile of which shows a strong positive correlation with the distribution pattern of pogostone. The protein encoded by PcAAE2 was biochemically characterized in vitro and shown to catalyze the formation of 4MVCoA from 4-methylvaleric acid. Phylogenetic analysis showed that PcAAE2 is closely related to other AAE proteins in P. cablin and other species that are localized to the peroxisomes. However, PcAAE2 lacks a peroxisome targeting sequence 1 (PTS1) and is localized in the cytosol.

Indexed as

Amino Acid SequenceCoenzyme A LigasesOils, VolatilePhylogenyPlant ProteinsPogostemonSequence AlignmentCoenzyme A LigasesOils, VolatilePlant ProteinsPogostone4-Methylvaleric acid •4-Methylvaleryl-CoAAcyl-activating enzymeBranched-chain fatty acidPogostemon cablinPogostone

Identifiers

PMID34255851
PMCPMC8643619
OpenAlexW3179626392

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.